Daphnia magna (water flea): 116916709
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Entry
116916709 CDS
T07514
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C
KO
K14411
RNA-binding protein Musashi
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116916709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116916709
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116916709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
116916709
NCBI-ProteinID:
XP_032777928
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All DBs
Position
LG2:complement(14228312..14231627)
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AA seq
445 aa
AA seq
DB search
MTSQQKFPGKEGGDSSNEQGKMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRS
RGFGFITFADPNNVGLVLQNTPHILDNRTIDPKPCNPRAEMVRAPRRSMGTGNGYKVFLG
GLPSNLTETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSI
NGKQVEIKKAEPRDTRGSSGGMRRGGHNGGWEGPGMGMHGGMGPMGGPMGGPMGPPMGGG
YQGWGGPANQGGYGYGPQGGYQGWGPQGQWGGYGGGGPGASYGYGPQGGPQQGGYNNWNW
GGPGPQGGPGGPGPNGDMYGRGPNPTNGGPPGAAAPTGPGVPGVKTEPAQYGAGYGTNGY
GTDVNQGYRGGYAQDASAQGYGGGQGYGNPERVPPPGVAPTGNGLGVPGAGAGAAGPGGP
GPQRGGGHHHQPSQSQYHPYRRGGV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcaacagaaatttcctgggaaagagggtggcgatagctcaaacgagcaaggg
aaaatgttcatcgggggtttgagctgggaaaccacccgcgataatttattacgatatttc
agccaatatggtgaagttgttgactgtgtggttatgaaaaacccagaaacaggaagatcg
agaggatttgggttcatcacatttgctgatccaaataatgttggtttagtactacaaaac
acacctcacatacttgacaatcgcacaattgatcctaagccttgtaatccgcgtgctgaa
atggtacgcgcgccacgtcggagtatgggtacggggaatgggtacaaagtatttttaggt
ggacttccatcaaacttgaccgaaacagatcttcgcaatttcttctcgcagtatggaaaa
gtttctgaggtcgttatcatgtatgaccaagagaagaaaaaatcaagaggctttggcttt
ttgacctttgaatcggaggagtcggtggatcgctgcactggtgaacactatgtttcaatc
aatggaaagcaggttgaaatcaagaaagcagagccacgtgacactcgaggatcatctggt
ggtatgagacgtggaggacacaacggtggatgggagggtcccggtatggggatgcatgga
gggatgggtcctatgggtggtcctatgggaggacctatgggccctccaatgggcggcggt
tatcaaggatggggtggaccagctaaccaaggcggttatggttatggaccgcaaggtgga
tatcaaggatggggtccacaggggcaatggggaggttatggaggaggaggaccaggagcc
agttacggctatggccctcaaggtggaccgcaacaaggtggatacaacaactggaattgg
ggaggaccaggtccacaaggaggtcctggtggtcctggccccaacggtgacatgtacggt
agaggtccaaaccccactaatggaggtcctcctggtgccgctgcacccaccggtcctggg
gtccctggggtgaaaacagagcctgctcagtacggtgctggctacgggaccaacggttat
ggcacagacgtaaaccaaggataccgaggagggtacgctcaggatgctagtgcccaagga
tatggtggtgggcaaggctatggaaatcctgaaagagttccaccccctggagttgcacct
acgggtaatgggcttggcgttcctggagcaggagcaggagctgctggtcccggaggacca
ggtccgcaacgaggaggaggacatcatcatcagccgtcgcaatctcaataccacccttat
cgccgagggggtgtctga
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