Daphnia magna (water flea): 116917059
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Entry
116917059 CDS
T07514
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116917059
09122 Translation
03013 Nucleocytoplasmic transport
116917059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116917059
03041 Spliceosome [BR:
dmk03041
]
116917059
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116917059
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116917059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Med15_C
Motif
Other DBs
NCBI-GeneID:
116917059
NCBI-ProteinID:
XP_032778312
LinkDB
All DBs
AA seq
689 aa
AA seq
DB search
MSKISKRIESESVKQDTKKNKNELSILAVANKVKESSKNFMEIEEKEVESRTGENDLKMF
KETCSEVRRLMTDILKLKVSGKTDEETKKKIMEKRVEASLLFVTLKKLNRIDKLRLKKAR
DTTHDAKQRVDSFHLQLENLLYEVFHLKKEVDKCLEFKSKDEDIELVPVEEFYQEAPPSI
SKTELTKSNQHKLTLARLEWEFEQRKRLSEQCRNLEQNREKASNEIAQKQKQLESLLPRL
NSILESTRPLQEELNLPVERIKFQKELALLLPDPLYILYSQIKAFIEACVLFYSDPSLQI
SIEGGMEDALNFGSKNKTGLDEILEDVDSAESDMEAEYETNKRTVTSNKMKTDWQLTRHP
LRIQLTVERVVINFAYLITLNIVVVDCKPLQRDNGIDQHCIIDNLLSEIFPNDHGDESPN
WVNCFQARSMVNGKINEQGKPYLWAQRLAGLDFNGVVKSTPQTFINTEFVESVVVALKNR
INYRFQFVKVLHLLEKGELNLNQDSNAAFPATIYSRLVSWAPSSYEECIVTSKNLDQLLN
FLEINPKALMFFKATIERESAKLLAIFVVPVDYPNSAPICSLELLWNGKHTRENSEIIRG
IEAEVNVSINELPPQHKIDILIVQLKKLTLHLDLITEIDGQLMKRGGGSWQSQAKPEFSA
EKMIPQLIKGHDRTFPTKYDAGSGFFLHQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatatctaaacgaattgaatctgaatcggtgaaacaagacacaaaaaaaaac
aaaaatgaactttcgatattagcagtggcgaataaagtgaaagaatcttccaagaatttc
atggaaattgaagaaaaagaagttgaatccagaacaggagagaatgatttgaaaatgttc
aaggaaacatgttctgaagtcaggagattgatgacagacattttgaaactgaaagtttca
ggcaaaacagatgaagaaaccaagaaaaagataatggaaaaaagggttgaggcatctctg
ctttttgtaaccttgaaaaaactgaaccgaatagataaacttaggctgaaaaaggcaagg
gacacaacccacgatgcaaaacaacgtgtggactcatttcatttacaacttgaaaacttg
ttatatgaagtttttcatcttaaaaaagaagttgacaagtgcttggagttcaagtcaaaa
gatgaagatattgagctagtcccagttgaagagttctatcaggaggcaccacctagcatt
tctaaaacagagctcaccaaaagcaaccagcacaagttaactttggcccgtttggagtgg
gaattcgaacaacgaaaacgtctctcggaacagtgccgcaacttagagcaaaatcgagaa
aaggcctcaaatgaaattgcccagaaacaaaaacaacttgaaagtctgttacctagacta
aattctattcttgagtctacacgtccactacaagaagaattaaatttacctgtggaacgg
atcaagtttcaaaaagaactggcgttgctgctgccggatcctctttatatcttatacagt
caaataaaagcttttattgaagcatgtgtattgttttactcagatccatcattgcagata
tccatcgaaggtggaatggaagatgccttgaattttggttcgaaaaacaaaactggtttg
gacgaaattctggaagatgtagattctgcagaatctgatatggaagctgaatatgaaact
aataaacgcacggtgacttcgaataaaatgaaaacagattggcaacttactagacatcct
ttacgtattcaactgacggttgagcgcgttgtaatcaattttgcgtacttaatcacattg
aatattgtcgttgtggactgtaagccattacagcgagacaatggaatcgatcagcattgt
ataattgataatcttctatccgaaattttcccgaatgatcatggcgatgaatcaccaaat
tgggtcaactgcttccaagcaagatcaatggttaatggcaaaattaacgaacaaggtaaa
ccatacctctgggcgcagcgattagccgggttagatttcaatggtgtggtgaagtctacg
ccccaaactttcatcaatacggagtttgttgaatcggttgttgttgcccttaaaaatagg
atcaactatcgttttcaatttgttaaggttttacatcttcttgaaaaaggtgaactaaat
ctcaaccaggattcgaatgctgcttttcctgcaacaatatattcgcggcttgtttcgtgg
gctccatccagttatgaagaatgcattgtgacctcaaagaatctggatcaactactgaac
tttctggaaataaatcccaaagcccttatgttttttaaggcaaccattgaaagggaatcg
gcaaagttacttgccattttcgtggttcctgtcgactatccgaactccgcaccaatttgt
tctttggaattactttggaatgggaaacatactagagaaaacagtgaaatcatacgggga
attgaagctgaggttaacgtttctattaatgaactacctccacagcacaaaattgatata
ttgattgtgcaattgaagaaattgacattacatctagatctgattacagaaattgatggg
cagttaatgaaacgagggggtggaagctggcaatcgcaagctaaaccagaattttccgcc
gagaaaatgattccgcaactgattaaaggtcatgatagaacatttccgaccaaatatgat
gctggttctggcttctttctacaccaatga
DBGET
integrated database retrieval system
