Daphnia magna (water flea): 116917163
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Entry
116917163 CDS
T07514
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dmk00535
]
116917163
04091 Lectins [BR:
dmk04091
]
116917163
Proteoglycans [BR:
dmk00535
]
Cell surface proteoglycans
Others
116917163
Lectins [BR:
dmk04091
]
C-Type lectins
Others
116917163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
116917163
NCBI-ProteinID:
XP_032778424
LinkDB
All DBs
Position
LG2:complement(8701288..8726926)
Genome browser
AA seq
2063 aa
AA seq
DB search
MKTVGTTSNHAVTMIVMAFFWISLSHVRAASFYGSSYIALPLQEARSATDLSFRFRTSRS
DALLFLAAGRTDYCLVVLQAAALKVRINLGAGEAEVATPRGLRLDDLAWHDVRIHRKDAD
FTLTVDGLHSSKLKLPGRFYELNIHYGLFVGGLGDFREIFLGLWDNFRGCLNDLHYNGVD
VLAKAKEREKSGSASSASTAVVQADGSAAVAFAVSWDCSAEFDATSDKDMSFLSADSYVS
FGGTGIAKTGSTVRFQLKTQSRDCVLLYSSGPPAKPDFAAVELVEGHLRVSLDAGGGSAV
DLFSDQAVNDGLWHQVELHLAAGTVELKIDGRSSSSSSSSGRDSGFLTSSPSNKYLELSG
QIYLAGVEPARHGRALAQGVRTANSSLRGCIRRLELDGRLLGLRDARVTRHVSADCQWHY
PCTSINPSPCVDGAQCSQDGLDHFRCECPQQPCTKPEFINYKATATSSSTSVMAGPSSGT
SSDSQPPVLNLSPVQVTEGGSMTLTSRHLQVQLDYEKFGVRESGVMFHVVRAPQYGRLFS
TLWRRADEATFTLLDVHSDRVRYVHDGSETLRDSALLELELAPRQGFLLPAYLQKRQRFV
LHLAVSPVNDPPELSLSPGKAVLRLVKHTRKALTQELLSAFDPDNQPKDLLYSVLNSKSD
GDMEGSIENKIQPGVAISTFTQEDVNQGRIWYVHRGSPNGRLALRVSDGAESGPTAVLRI
AAFDLQLFLANNTGLVVPVNGSAALTAANLTFSTNAPDQELDIRYDITRPPQHGQIQAWR
SGRWQSINWFNSGQLQRNERIRYVHLPTGFQPPASQDDFQFSVSVALEVAEVFRSPIMYQ
FRFQLLDAVLREESNRGLSIIGGSTQSVAIGSALLKFVVEPQSNAEEEVIYTLMDAPLYG
SLWIQSQSNPLDTGSKWSQSVLNSQRLQYRLARRTLSSLRDHFSFRVTSSGLASDLRRFE
INYSPGNDTPTVTATIGELLVNEGETAVLQVSLLGFSIPLAINYTVLEKPAYGQLNLLDV
GKRSATRKNISWFSSDDLTDQRIVYTHDDSESITDKFVFLARPRVSPDDPSKDFQYVGTF
PIRAHMKNDNPPLRVGDQVLRVVTNGERRLTSDILRYIDPDVDTSPASIVYSPRGASNGG
FYLTDRPDVQVFQFSQEDVNEGKILFRHTGSPYGRTTLWITDNQYHVTGTLEVQASEPFL
ERVNQSRLMVRRGYFAALSIDQLGMVSNLDYDSNELAFYLLDQPQHGSVQVNGSTILKME
SFTQEELLSEKVTYQSKNQTEGKDWFKLRAVLRRVEYECIVEVRIYPESYWHPLKVLHNE
LVTVEEGTSFTIDASSLKMSHPQGVNRQDVTYIVHQPPLHGYLEVDRDENEYEDLVTGRS
ANLLPPEVHVFDQSAIDEQRLHYIQSGANQSADHFVFDVTNGVVTLTNLTFQLAIIPKSI
YLLTRPIEVLEGGHSVLTVSDLKIVTRYYADKVDSFLVVKLPLHGNLQLKSAATDDDPLT
QFTYTQLIEKQVLYWHDGSEEANDTLDIVALAGKKESLPATIHIQVRPVDDERPILVNNT
GILVWQGSTTVLDKAQLGASDVDTLPQSIEFSFGRADCGYMTSGSNLTDPVTTFTQQQID
LHQIAFVHQGKTNCTVPFNLTDGQSALPSQHHLKISARKMQVRLVRNQRLHVFPMMQQSI
TSAQLLAVTSGDVLTNRQQNVPRFQVTRPPRLGRLLLEQADGSTKRVTSFTQRDLNQSLV
IYEHTEPFADVSVNDSFIIDVMSELSSPLQQQQFNIEISVATMAEGGLDRYLGLVALETE
EGGTAIIREKNLNLSGIVQLISSYQGVLATQPPRLRLVLSQAPQHGFVSVSGRRVGLGSE
MTAGEISAGRVEYQHDHSDTLDDSIGLTVLLQRPEKGSDRPDILLYNGTLRVTILPVNDQ
IFHLLTKAPAMTVVERQWRAITAEVLLTEDADTSAKDLIYDVIQPPQFGKLALTAENATI
IAGATTGPPLLRFSQDDVNRGRVVFLHDGTMDPRSTFFIFRVSDGHFKADSGVFSIHFEP
LTLRFANHSIIGILQGQSTACHC
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgggcacaacgtccaatcatgccgtcacgatgattgtgatggcatttttc
tggatttctctcagtcacgtccgtgcagcttccttttacggatcgagttacatcgcgctg
ccgctgcaggaggcccgctctgcgacggatctgagcttccgcttccggacgtcgagatcg
gacgccctgcttttcttagcggcaggacgcaccgactattgcttggtggttttacaagcg
gctgctttgaaggtgcgcatcaacttgggagccggcgaagcggaggtggccactccgcgc
ggattgcggctcgacgacttggcctggcatgacgtgcgcatccatcgcaaagatgccgac
ttcacgctgactgtcgacggtctccattcatccaaattgaaattgccagggcgtttctac
gagctcaacatccattacggcctctttgtgggcggcttgggcgactttcgcgagattttc
ctcggattgtgggacaacttccgaggatgtctcaacgacctgcactacaacggcgtcgac
gtcctggcaaaagccaaggagcgcgaaaagagcggcagcgcatcatccgcatcgacggcc
gttgtccaggcggacggaagtgctgccgtcgccttcgctgtcagctgggattgcagcgcc
gagtttgatgccacgtccgacaaggacatgagcttcttgtcggccgattcttacgtgtcg
ttcggtggcacgggcatcgctaagacgggctcgaccgtccgtttccagctcaagacacag
agcagggattgcgtgctgctgtacagtagcggacctccagccaaaccggatttcgcggcc
gtcgaactggtcgagggacatttgagagtcagtttggatgcgggcggaggcagcgctgtg
gatctgtttagcgatcaagccgtcaacgatgggctttggcatcaagtcgagctccacctg
gcggccggaactgtcgaactgaagatcgacggtcgttccagctcgagcagcagcagcagc
ggtcgtgattcgggatttctaacgtcttcgccttctaataaatatctggaactgagcgga
caaatctatttggcgggagtcgaaccggcccgtcatggaagagctttagctcaaggcgtg
cggacggccaacagcagtctacgcggttgcatccggcgtttggaattggacggccgtttg
ttaggcttacgcgatgcccgcgtgacacgacatgtttcggccgattgtcaatggcattat
ccttgcacgtctatcaacccatcgccgtgtgtggacggcgcccagtgttcgcaagacggt
ctggatcatttccgttgcgagtgcccgcaacagccgtgcactaaaccggaattcatcaac
tacaaggcgaccgccaccagcagcagcacatccgtcatggcgggaccgtcttccggcacc
agttccgactcacaaccgcctgtcctcaatctttctcctgttcaggtgacggaaggaggt
tcgatgacgttgacgtcgcgtcacttgcaagtgcagctggattatgaaaaattcggggtc
cgcgaatccggtgtcatgttccatgtcgtcagagcgccacagtacggccgtctgttctcg
acgctgtggcgtcgtgctgatgaagccactttcactttgctggacgtccatagcgatcga
gtgcgttacgttcacgacggctccgagacgttacgcgattccgccctgctggaactggaa
cttgcccccagacaaggattcctgctgccggcttatttgcagaaaaggcagagattcgtt
ctgcatttggccgtcagtccagtcaacgatcctccggagctttcgctgtcacctggcaaa
gctgtcctccgattggttaaacacacacgcaaagcgctgactcaagaactcctatcggct
ttcgatccggataatcaacccaaagatcttctctattccgttctcaactcgaaaagcgat
ggcgacatggaaggttctatcgagaacaaaattcaaccaggtgtggcgattagcaccttt
acgcaagaggatgtcaatcaaggaaggatctggtacgttcatcgaggttcacctaatggc
agattggcgttgcgagtatcggacggagcggagagcgggccgaccgctgtgctgcgaatc
gccgctttcgacttgcaactattcctggccaacaacacggggcttgtggtgccggtcaac
ggctcagccgcactgacagcggctaatctaacgttcagcaccaacgctcctgatcaagag
ctggacattcgttacgatattaccagaccgccgcaacacgggcagattcaagcgtggaga
tctggccgttggcaatcgatcaactggttcaattccggccagttgcagcgtaatgaacgc
atccgttacgttcatctcccgactggatttcaaccaccggctagccaagatgatttccaa
ttctccgtttcggtcgctctggaagtggcggaagtcttccgctcgcccattatgtaccag
ttccgcttccaactgctggatgctgtcttgcgggaggaaagtaaccgcggcttgagcatc
atcggcggatcaacgcagtcggttgccatcggcagcgctctgttgaagttcgtagtcgaa
cctcagtcgaacgcggaagaagaagtgatttacactctgatggatgcgcctctttacgga
tcgctgtggattcaatcgcaatcgaatccgctggacacgggatccaaatggtcgcagagt
gtcctcaattcgcagcggcttcagtaccggctagcgcgtcgcacgttgtcctctttgcgg
gatcatttcagtttccgcgttacttcatccggactggcatcggacttgcgacgtttcgag
ataaactacagccccggaaacgatacgccgactgtcacggccactatcggcgagttattg
gttaacgaaggcgaaactgctgtgttgcaggtcagccttttgggcttctcgatcccgttg
gccatcaattatactgtgctggagaaaccagcctacggccaactcaatttgctggacgtc
ggtaaacgatccgcgacgcgtaaaaacatcagctggtttagctcggacgatctaactgat
cagaggatcgtttacacgcacgacgacagcgaatccatcaccgataaattcgtgtttctc
gcccgtccgcgggtatcgccagatgatccctccaaggatttccaatacgttggcacgttt
cccatccgtgcgcacatgaagaatgataatccgccgttgcgtgtgggcgatcaagtcctg
cgcgtcgttaccaatggggaacgtcgactcacttcagacatcctaagatacatcgatcca
gatgtggatactagcccggctagcattgtttattcgccacgtggagcatcgaatggagga
ttctatctaacggacaggccagacgttcaagttttccaattcagccaggaggatgttaac
gaagggaaaatcctcttccgccacactggaagcccatacggccgcacgacactgtggata
acggacaatcagtaccacgttaccggaacgctggaagttcaggcgtctgagccttttctt
gaacgggttaaccaatcaagattgatggttcgtcgtggctattttgccgctctgagcatc
gatcaactcggcatggtgtctaaccttgattacgactccaacgaattggctttttacttg
ctggatcagccacagcacggctcggtgcaggtgaacggctctaccattttgaagatggaa
tctttcacccaagaagaacttctttcggagaaagtcacatatcaaagcaagaatcagacg
gaagggaaggattggtttaaattacgtgctgtcctcaggagagtcgaatacgaatgcatc
gttgaagttcgaatttatccggaaagttactggcatccgctgaaggtccttcacaatgaa
ctggtcactgtggaagaaggcacaagtttcacaatcgacgcgtcttcgttgaaaatgagt
catccgcagggcgtgaatagacaagacgtgacttacatcgttcaccagccaccgttgcac
ggctatttggaagtggatcgagacgaaaacgagtacgaggatctagtgactggccgcagt
gccaatctgctgccacctgaagtgcacgtcttcgatcaaagcgctatcgatgagcagcgc
ttgcactacatccaatctggtgccaatcagagtgccgatcactttgtttttgacgttacc
aacggtgtggttacgctgaccaacctgactttccaattggctattatacccaaatccatt
tacttgctgacacgacccattgaagttctcgaaggtggacattcagttctgaccgtctcc
gatcttaagattgtcactcgttactacgccgacaaagtggacagtttcttagtcgtcaaa
ctgcccctccatggcaatcttcaactcaagagcgctgcaaccgatgatgatcctttaact
cagtttacctatacgcaattgatcgagaaacaagtgttgtactggcacgatggaagcgaa
gaagctaatgatactcttgacattgttgctttggccggcaaaaaggaaagtttaccggcc
acgattcacatccaggtacgaccggtcgacgacgagagaccgatcctcgttaataacacg
ggcatcttggtttggcaaggttctaccactgtgttggacaaagctcaactcggtgcttct
gatgttgatactctgccgcaatcgattgaattttcattcggccgagctgattgcggctac
atgacgtccggttcaaatctgaccgatccagttacgacgttcacgcaacaacagattgac
ctacatcaaatagcatttgtccatcaaggaaagaccaactgcacggtgccctttaatctg
acggacggtcagtcggcattgcccagtcaacaccatttgaaaataagtgctcgtaaaatg
caagtgcgtttggtacgcaatcagcgtcttcatgttttcccgatgatgcaacaatccatc
acgtcggcccaattactggcggttaccagcggtgacgtattaactaaccgccagcaaaat
gtacctcgtttccaggtgactcggcctccacgtctcggacgactactcctggaacaggcg
gacggttcgaccaaacgagtcactagtttcacccaacgagatctcaatcaaagtttggtt
atctatgaacatacggagccattcgctgacgtcagcgtcaacgacagtttcatcattgac
gtcatgtctgagcttagctcaccgcttcaacagcaacagtttaacatcgaaatttctgtt
gccaccatggcggaaggtggactcgaccgatatcttggtttggtagcccttgaaactgag
gaaggtggaacagcaattattcgagaaaagaatttgaacttgagcggcatcgtccagctg
atcagtagctaccaaggtgtgcttgctacccaaccaccaagattacgattggtgttatca
caggcacctcagcacggattcgtatccgtcagtggtagacgggtgggccttggtagcgag
atgacagccggagaaatctcagctggccgagtggaataccaacacgatcattctgatact
cttgatgattcgatcggccttaccgtattgctgcagagaccggaaaaaggatcggatcga
ccggatatcctcctctacaacggaacacttcgcgtcactattttgcccgtcaatgatcaa
atctttcacttgttgaccaaggctccagccatgacagtagtagagcgtcaatggagagcc
atcacggcggaagttttgctaacggaagacgctgatacttccgccaaggatttgatttac
gatgtgattcaacccccacagtttggtaaacttgctctaacggccgagaatgcaacgatc
attgctggagctacgactggaccgccattgctccgtttcagtcaagacgatgtcaaccga
ggacgggtagtcttcctgcacgacggaacgatggatcctcgttcaacgtttttcattttc
cgcgtgtctgacggccattttaaagcggatagtggtgtttttagcatccactttgagcct
ctgacgctccgttttgccaatcactccatcataggtattctgcaaggtcagtccacagcc
tgtcattgttaa
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integrated database retrieval system
