Daphnia magna (water flea): 116917227
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Entry
116917227 CDS
T07514
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04137
Mitophagy - animal
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116917227
04137 Mitophagy - animal
116917227
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116917227
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116917227
04121 Ubiquitin system [BR:
dmk04121
]
116917227
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116917227
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116917227
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Others
Others
116917227
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116917227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
Rhodanese
zf-MIZ
DUF2115
Motif
Other DBs
NCBI-GeneID:
116917227
NCBI-ProteinID:
XP_032778517
LinkDB
All DBs
Position
LG2:complement(11868411..11872812)
Genome browser
AA seq
1021 aa
AA seq
DB search
MELYLGESVDQLNLQAELPSEKLKLANPRLLVVTAVKLYNRAVELRDKGDAELSYVSFMK
YLNLVNTIRKSPEYKKDEKFFNNLLGTKNVRNAIENAENLQKDLQRRYDDRAEELVIRKK
LEIKEKQEKEAKEKQIEEKSTNVEAYSPNFPSVDGGFISSWQLEAMIKQKSTSFIIFDVR
SKEDFENSHIKHTNCVSIPEDKLKPGLSAAALYKTLPLEAKVDWPKRLTADVIILVDWFG
EKLPGSAIYALEEILTKWDPSSKYKGVIKVLSKGYDEWLFRFPMQTTNPHANAVAKPSKV
EDISPVEYIEYPDFDEATKPPAIEPTASPLPFINRTNKPAVKKIDEISVEPSIQPVPLPR
SNIPKTPSDDQDIDDGFVTGSSSVNRMGSVPKIDRSLKTEAMVKYLQDEEKLVEKHLAIT
EDRLEKEKEWDRIRREKEASANDEIANHLQEREKEMVELFKKMENDNKQQELEIARLRKE
VETIRRDADTSNDKTKPDAEETNIQARITDKEVKQAAMNREVERLRELRKKSEKTREKER
DEQEKEEEYKRGMQRLKDEQTRKNEEMKKKRDEENKQEEETRKRLEKQRQNFSRKEVSKI
DRLKDEPSSGFGLGSKMNRSHSTPDLAQALQKESERGTKVAKVDRDLKLHDTNRTNIIRN
SDLSKNRNFNPVYGNMGRGLTGLKNLGNTCYMNSILQCISNSMLLTNFFVDGSYRNYLNA
SNKQTRGEISDEVSSTLNALWSGQYRSISCKDLKNAVGRYKSSFRGYEQQDSHEFLTILV
DWLHEELNEIRVKRPLKEQNNYDIPDEKAANMAWEDYSASNKSIIVTLFAGQQRSSLRCT
TCSKESVTFEPFFNLSLPIPPSNTQCSIMECFQLYTKPEQISGWSCPFCKNKRGASKKID
IWKLPPVLVVHLQRFYNDGLWRKRLNMVDFSVNELDLKDVVKSNKPRYTRFKLYAVSNHY
GTMDAGHYTAYCKNAEYNKWFKFDDQDVMEISGNEVRSSAAYILFYTAIDYRAPPVNVIQ
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtatcttggagaatcagttgaccaacttaatcttcaagcagagttaccatcg
gagaagttgaagttagccaacccgcgattacttgttgtaacagctgtcaaactatacaat
cgagctgttgaactgcgtgacaagggagatgcagagttgagctatgttagctttatgaaa
tacttaaacctggtgaacacaataaggaagagtcctgaatataaaaaagatgaaaaattc
ttcaacaacttgcttggaactaaaaatgtaagaaatgcaatcgagaatgcagaaaatctc
caaaaagacctacaacggaggtatgatgatagagctgaagaattggtcatcagaaaaaaa
ctcgaaataaaagagaagcaagaaaaggaagccaaagaaaagcaaatagaagaaaaatcc
accaatgttgaagcctactccccaaactttccatctgttgatggtggttttatatcttca
tggcaattagaagccatgattaagcaaaaatccacatcttttatcatatttgatgtgcga
tccaaagaagattttgaaaattctcacataaagcacacaaattgtgttagcattccagag
gataaattaaaacctgggttgtctgctgctgctttgtacaaaactctgcctctagaagcc
aaggtggattggcccaaacgtttaactgcagatgtgataattttggtagattggtttgga
gaaaagcttccaggatctgcaatttatgcacttgaagagatcttaacgaagtgggatccc
agctcaaagtataaaggagttatcaaggtgctaagcaaaggctacgatgagtggttattt
agatttccaatgcaaacaacgaatccccatgctaacgcagttgcaaaaccgtcaaaagta
gaagatatcagtcctgtcgaatatatcgaatatcctgattttgatgaagccacgaagccg
ccagcgattgaaccaactgcttcccccctgccgttcataaatcgaacgaataaacctgca
gtcaagaaaattgacgaaatatcagttgagccgtccattcaaccggtgcctcttccgaga
tcaaacattcctaaaacaccatctgatgaccaagacatcgatgatgggttcgtaactggt
tcctcgtctgttaatcggatgggttcagtcccaaaaattgaccgaagcttgaagacagaa
gctatggtaaagtaccttcaagacgaggagaagttggttgaaaaacacttagcaatcaca
gaggatagattggagaaagagaaagaatgggataggataagaagggaaaaagaagcttca
gcaaatgacgaaatcgccaatcaccttcaagaacgagagaaagaaatggttgagttattc
aagaaaatggaaaacgataacaaacaacaggagttagaaattgctcgtcttcggaaagag
gtagaaactattcgacgtgatgcagatacctccaacgacaaaacgaagcctgacgccgaa
gaaacaaatattcaagcgcgcatcactgacaaagaagtaaaacaagcagccatgaatcgt
gaggttgaaaggcttagggagttacgtaaaaaatccgaaaaaactcgagagaaagaaaga
gatgaacaagaaaaagaagaggaatacaaaagaggaatgcaacgattgaaagatgagcaa
acgagaaaaaatgaagagatgaagaaaaagagggacgaagagaacaaacaagaagaagaa
acaaggaaaagattagaaaaacagcgacaaaacttttccagaaaagaggtttcgaaaata
gacaggttgaaagatgagccgtcttctggattcggtttgggttcaaaaatgaatcgttct
cattcaactccagatttagctcaggctcttcaaaaagaatctgaacggggtaccaaagtg
gcgaaagttgaccgtgatctaaaactgcacgatacaaatcgaacaaacatcatccgcaat
tctgatttgtcgaaaaatcgaaattttaatccggtatatggaaacatgggtcgtggtctg
actggattgaaaaatttgggcaatacttgttacatgaactccattctacaatgcatttcg
aatagcatgcttctgacaaatttctttgtcgatgggtcttataggaattatctcaacgca
agcaataaacaaactcgaggtgaaatttcagatgaagtttcttctactttgaatgctctt
tggagtggccaatatcgttcaatctcatgcaaagacctaaaaaatgcagtcgggcgctac
aaatcatcgtttcgcggttacgagcaacaagactcgcacgagtttctcacgatactagtg
gattggctgcatgaagaattgaatgagattcgcgtgaaaaggccgttgaaagaacaaaac
aactatgatattcctgatgaaaaagctgcgaacatggcttgggaggactattccgcttca
aataaatccatcatcgtcacgctgtttgctggtcaacaaagatctagtttacggtgtacc
acctgctctaaagaatcagtgacgtttgagccgtttttcaacctgtctcttcccattccg
ccatccaacactcagtgcagtattatggagtgctttcaactgtacacgaaaccggaacag
atcagcgggtggtcgtgcccattttgtaaaaataaacgaggagctagcaaaaaaattgac
atatggaagttacctcctgtgctagtcgtccatcttcaaagattttacaacgacgggtta
tggagaaaacggttgaatatggtggactttagtgtgaatgaactggacttgaaagacgtc
gtgaaaagtaataagcctcgctatactcgcttcaaactttacgccgtgtcgaatcattac
ggtacaatggatgctggacactataccgcttattgcaagaacgcagaatacaataagtgg
ttcaaatttgatgaccaagacgtgatggaaattagtggcaatgaggtccgttcttcagct
gcatatattttgttctatactgcgatagattaccgagccccacctgttaatgttattcaa
gactga
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