Daphnia magna (water flea): 116917237
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Entry
116917237 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116917237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116917237
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116917237
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
116917237
NCBI-ProteinID:
XP_032778536
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Position
LG2:complement(11982089..11985670)
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AA seq
754 aa
AA seq
DB search
MRRSLAPSQLGQVKRKYDDEDDDPAWSEKKKSGKNKKTQVLDRATEFLSPYRKPLTQCSL
AVVESNSETSGSTFHEQLIKKILSKPFKIPIPNYTGPTLGKSLGLRRAGIRQALHDPDEP
GALILYAPPELSAHEKLKTSLSDKHPVHVVVDPVLTKVLRPHQREGVKFMYDCVTGQCIE
NNYGCIMADEMGLGKTLQCITLLWTLLKQGPDCKPLITKGIIVSPSSLVKNWQNEISKWL
SGRLNSLVIDSGSKDEIDRNLNGFIHTHGRRVVNPVLIISYETFRLHAHELHQGEIGLVL
CDEGHRLKNSENQTYQALVALNCKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAQEFK
RRFETPILRGRDADATEETQKQGQGKLKELADLVNKCIIRRTSALLTKYLPVKIELVVCV
KLGPVQASIYKKFVTSEAIKSKMRETNEKPSKTSMTALAAITNLKKLCSHPELIYDKCQS
GVDGFEDTLPLFPVNFDPRKLQTELSGKLCVLDCILAMVKSTTNDKIVLISNYTQTLDLF
EKLCRMRTYPCVRLDGSMSIKKRAKIVERFNDPASSDFVFLLSSKAGGCGLNLIGANRLV
MFDPDWNPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVDNE
DDVERHFSLSDLRDLFKLEEQTMSDTHDKFKCRRCVNRIQVKPPPDDATCNSDLSQWNHC
ADRKTIPDPILKSAWDAGVTFAFHQKSHEPKIVP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgagacggagtctggcgccaagccagttggggcaagtaaaacgaaaatacgatgatgaa
gatgatgaccctgcttggtctgaaaaaaagaaaagtggcaaaaataagaaaacgcaagtg
ctagatcgagctacagagtttttatcgccgtatcggaaacctcttacacaatgcagtctc
gcagttgttgaaagcaattcagaaacatctggatcaacattccatgaacaactaattaaa
aaaatcttgtcaaagccatttaaaattccaataccaaattatactgggccaacccttgga
aaatcacttggcttaagacgagctggaatacggcaagctctacatgacccagatgagcct
ggcgcattgatcttgtatgcacctcctgaactttctgcccatgaaaaactgaaaacatcc
cttagtgataaacaccctgtccatgttgttgtagatccagttttgactaaggtattaaga
cctcatcaacgtgaaggtgtgaagttcatgtatgactgtgtcacaggtcagtgcatcgaa
aacaactatggttgtatcatggctgatgaaatgggtctaggaaaaactttgcaatgtata
actttgctttggactttactcaaacaaggcccagactgcaagccactaattactaaaggc
ataattgtgtcacccagcagtttggtcaagaattggcaaaatgagatctcgaagtggctt
agtggccgactcaattcactggttattgactctggaagtaaagatgaaatcgatcgcaat
ttgaatgggttcatacatacacatggtcggcgagtcgtcaatccagttctgataatctcc
tacgaaacattcagacttcacgcgcacgaacttcaccagggagaaattggacttgttctt
tgtgatgaggggcatcgtttgaaaaacagtgaaaaccagacgtaccaagctctggtggcg
ttgaattgcaaacgccgtgttcttctgtccgggacgcccattcaaaatgatttgctggag
tattttagtttgttacattttgttaaccaaggcattcttgggactgctcaggagttcaaa
agaaggtttgagacgcccatcttgcggggcagagacgctgatgcaacggaagagacgcag
aaacagggccaaggaaaactcaaagaactagcagatctagtcaataaatgcatcattcgg
cgaacgtccgcattattaaccaaatatctaccagtcaaaattgaattggtggtctgcgtt
aaactcggtcctgtgcaagcgtccatatacaaaaagttcgtcacgtcagaagctatcaag
agcaaaatgagagaaaccaacgaaaaaccgagtaaaacgagcatgactgctctggctgcc
atcacgaatttaaagaaactctgcagccatccagaactgatttatgacaagtgccaatcg
ggcgttgacgggtttgaagacactctgccattatttcctgtcaactttgatccgcggaag
ctgcaaacagaattgtctggaaagctttgcgtcctcgattgtatattggccatggtgaaa
agcaccaccaatgacaagatcgtcctgatttcgaactacacacaaactcttgatctattc
gaaaaactttgtcggatgaggacctatccatgcgtccgtctggatggaagcatgagcatt
aaaaaaagagccaaaattgtcgaacgcttcaatgaccctgccagttcggatttcgtattt
ttgctcagcagcaaagcaggtggttgtggcttgaacctgattggagccaatcgtttggta
atgtttgatcccgactggaatccggccaatgatgatcaggctatggctcgcgtttggaga
gacggacaaaagaaaccctgtttcatttatcgtctgctgtcgactggcaccatagaggaa
aagatctttcagcgacaggctcacaagaaggcactcagttcctgtgtggtagataacgaa
gacgacgtggagcggcatttcagtctctcggatttacgcgatttatttaaactggaagaa
caaacgatgagcgatacgcacgacaaattcaaatgccgccgttgcgtcaatcggatccaa
gtgaaacctccaccggacgacgccacttgcaattctgatttgtcccaatggaatcactgt
gcagatcgcaaaactattccggatcctattctcaaatctgcctgggacgctggagttaca
ttcgccttccaccaaaagtcccacgagcctaaaatcgtcccttga
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