Daphnia magna (water flea): 116917249
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Entry
116917249 CDS
T07514
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116917249
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmk00536
]
116917249
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C46: hedgehog family
116917249
Glycosaminoglycan binding proteins [BR:
dmk00536
]
Heparan sulfate / Heparin
Morphogens
116917249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS_2nd
Motif
Other DBs
NCBI-GeneID:
116917249
NCBI-ProteinID:
XP_045025809
LinkDB
All DBs
Position
LG2:complement(12167670..12194271)
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AA seq
548 aa
AA seq
DB search
MASFECWSSCSNSARPTMCSQEAGSVRTRRRISVGVCNDCGVKQIKCSLSYSSRRHVRRP
HDHRSSAGYCYWLLVLLVVLSALLPAPATACGPGRGANRRRSPRKLTPLVFKQHVPNVSE
NTLGASGLTEGKITRDDPRFQQLVPNYNTDIVFKDEEGTGADRLMTQRCKEKLNTLAISV
MNQWPGVKLRVTEGWDEEGLHAANSLHYEGRGVDITTSDRDRSKYGMLARLAVEAGFDWV
YYESRAHIHASVKSESSQAARHGGCFPPESTVLVENGTTRKLSELSVGDRIQSMDSQGRL
VFSPVLLFLDRDLTEERDFVQLQSADGATVTMTASHLIYTVASQDLLEDVDIDLTNEQLQ
SNSLTSDESSSAEDEDRLLGQLMANATMERFGSRLKATFASKVQIGDWIVSTGPDGRPKP
QRVVGVSAVSQRGVLAPLTEEGTLVVDQVVVSCYAVIDDQTIAHLAFSPVRLLNNVHKSL
VHFWRAISWWNHDRTTVDAAGSSIPVKHVEARSMTNENRPPTLVGIHWYAKLLYRIARVV
LPSHLVFN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttcgagtgttggtccagctgtagtaatagtgcaaggcctacgatgtgctca
caagaggctggaagcgttcggactcggcggcggataagcgtcggcgtctgcaacgactgt
ggtgtcaagcaaatcaaatgctcgttatcttattcgtcacggcgacacgttcgccgccct
cacgatcaccgctcatcggctggttattgctattggctgctcgtcttgttggtcgtgttg
agcgctttactgccggccccggcgacggcctgcggtcccggccggggcgctaatcgccga
cggtcgcctcgcaagttgacgccgctcgttttcaagcagcacgtgcccaacgtgtcggag
aacacgctcggcgctagtggactgaccgaaggcaaaatcacgcgtgacgatccgcgattc
cagcagctcgtacccaattacaacacggacattgtcttcaaagacgaggaaggcactggc
gctgaccgtctcatgactcagcgctgcaaagagaagctgaacacgttggccatttcggtg
atgaaccaatggcctggcgtgaaattgcgcgtgacggaaggctgggacgaggaaggcctg
cacgctgccaactcgttgcactacgaaggaaggggcgtcgacattacgacatcggatcgc
gaccgttccaaatacggcatgctggcacgtctggccgtcgaggctggattcgactgggtc
tactacgaatcgcgggctcacattcacgcttcggtcaaatcagaatcatctcaagctgcc
cgtcacggaggatgtttcccgcccgaatcgacggtgctcgtcgagaacggcaccaccaga
aagttatccgaactttcagttggcgatcgaattcaatcgatggactcgcaaggccgtttg
gtcttcagtcccgttttgctcttcctcgaccgcgatctgaccgaagaacgtgatttcgtt
caacttcaatcggctgatggcgccaccgttacgatgacggccagtcatttgatctacacg
gtggccagccaagacttactggaagacgtcgacatcgatctgacgaacgaacaattgcaa
tccaacagtttgacctctgacgagagcagcagcgcagaagatgaagatcgattgttaggc
cagctgatggccaacgccacaatggaacgtttcggctctcgtctgaaggccactttcgct
tccaaggtgcaaatcggtgattggattgtctcgaccggaccagatggtcgaccaaaacct
cagcgggtggtcggcgtttcggccgttagccagcgaggtgttttagcaccgttgaccgag
gaaggcacgctcgtcgtcgaccaggtggtcgtgtcttgttacgccgtcatcgacgatcaa
acgatcgcccatttggccttttctcccgtcaggctactcaacaacgtgcacaagagtttg
gtccacttttggagagccatcagctggtggaatcacgaccggacgacggtcgatgcagcg
ggcagcagcatcccagtcaaacatgttgaggctagatcgatgaccaatgagaacagacct
ccgacgttagtgggcatccattggtacgccaaattgttgtacaggatagcacgagtcgta
ctgcccagtcacttggtcttcaactga
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integrated database retrieval system