Daphnia magna (water flea): 116917283
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Entry
116917283 CDS
T07514
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00260
Glycine, serine and threonine metabolism
dmk00270
Cysteine and methionine metabolism
dmk00450
Selenocompound metabolism
dmk00670
One carbon pool by folate
dmk01100
Metabolic pathways
dmk01230
Biosynthesis of amino acids
Module
dmk_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116917283
00270 Cysteine and methionine metabolism
116917283
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116917283
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116917283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116917283
Enzymes [BR:
dmk01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
116917283
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116917283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Met_gamma_lyase
Aminotran_5
GDC-P
Motif
Other DBs
NCBI-GeneID:
116917283
NCBI-ProteinID:
XP_032778618
LinkDB
All DBs
Position
LG2:11914875..11924218
Genome browser
AA seq
394 aa
AA seq
DB search
MSAEGFKEQDPTFATRAIHDAQDPEQWDAMPVVLPISLATTFKQDAPAQFRSYEYSRSGN
PTRTTFEKVLASLEGAKHGLTFASGLAASTTIVHLLSAGDHIVSMDDLYGGTNRYLRKVA
DRMNIKTTFVDATNPENVEKAIQENTKLVWVETPTNPTLKLVDIAAVAEIVHKRENILLV
VDNTFLSSYFQRPLELGADIVMHSLTKYMNGHSDVIMGAAMTNDDDVHTRLRFLQNAIGP
VPSPFDCFLVNRSLKTLHLRMREHMKNGLAVARYLENHPCIERVIHPGLPSHPQHELAKR
QCYGHSGMITIYIKGGLSESRAFFKALKVFTLAESLGGYESLAELPSLMTHASVSAEERA
ILGITDNLIRLSVGLEDVGDLIADLDQALRAAVA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagggttcaaagagcaagaccccacatttgcaactagggctattcatgat
gcacaagatccagaacaatgggatgccatgccagttgttcttcccatttctctggcaact
actttcaaacaggatgccccagctcaattcagaagttatgaatacagtcgaagtggaaac
ccaaccagaactacctttgaaaaagtgctagcttctcttgagggagctaaacatggattg
acttttgcctctggactggcagcttcgaccactattgttcacctactgagtgcaggagat
catattgtctccatggatgatttgtatggaggtaccaatcgctaccttaggaaggtagct
gatcgaatgaatatcaaaactacctttgttgatgccaccaatcctgagaatgttgaaaaa
gctatacaagagaatactaagctggtgtgggtagagactcccacaaatcccactttgaag
ctggttgatattgcagcagtagctgagattgttcacaagagagaaaatattcttttggtt
gtagacaatacctttctttcctcctatttccagagaccattggagctcggagctgatatt
gttatgcactcactaaccaaatatatgaatggccactcggacgtcataatgggggccgcc
atgacgaatgatgatgacgtccatactcgtcttcgcttcctccagaacgctattggacca
gttccatcgccattcgactgtttcctggtcaaccgcagtttgaaaactttgcaccttcgc
atgcgggagcacatgaaaaacggacttgccgttgctcgctatcttgaaaaccacccctgc
atcgaacgcgtcattcatccaggactaccgtcgcatccgcagcatgaacttgctaaacga
cagtgttacggtcatagcggaatgatcaccatttacatcaaaggaggactgtcagagtct
cgcgctttcttcaaagcactcaaggtgttcaccttggctgaaagcttgggaggatacgag
agtttagcagaactgccttcactgatgactcacgcttcggtcagtgcagaagaacgggcc
attttaggcatcactgataacttgataaggttatctgtcggtctggaagatgtcggtgat
ctaatagctgatctagatcaggcgctaagagctgcggttgcctaa
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