KEGG   Daphnia magna (water flea): 116917290
Entry
116917290         CDS       T07514                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03082  ATP-dependent chromatin remodeling
dmk03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116917290
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116917290
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dmk01009]
    116917290
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116917290
   03036 Chromosome and associated proteins [BR:dmk03036]
    116917290
Protein phosphatases and associated proteins [BR:dmk01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116917290
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116917290
    SWI/SNF complex
     116917290
Chromosome and associated proteins [BR:dmk03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    116917290
   PBAF complex
    116917290
   SWI/SNF complex
    116917290
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 116917290
NCBI-ProteinID: XP_032778633
LinkDB
Position
LG2:11872943..11874731
AA seq 370 aa
MSLKTYGDRPISFQLEENGEFYCIGSEVGNYLRLFRGSLYKKYPGMTRRLITSEERKRLG
DLGLNQHILASNISLLRATEVEDIIEGREEKYRAVSVQTIEPLFPKDPKAKKPIPWVPAI
PNSSHLDAVPQATCINRNRLGPKKVRTFPLCFDDTDPAGVHENSNQLELLVPIRLDMEIE
GQKLRDTFTWNRNETLITPEQFAEVLCDDLDLNPITFVPAIAQCIRQQLDSFPAEGEALI
EGQTDQRVIIKLNIHVGNISLVDQLEWDLSEPNNSPEQVALKICAELGLGGEFVTAIAYS
VRGQLSWHQRTYAFSEAPLSSVELPFRPQAEAEQWSPFIETLTDAEMEKKIRDQDRNTRR
MRRLANATPW
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtctttgaaaacttacggagatcggccaattagtttccaactggaagaaaatggggag
ttttattgtattggatctgaggtcggaaactatcttagattgtttcgagggtctctatac
aagaaatatcctggtatgacccggcgccttataacatcagaagaaaggaaacgattgggc
gatctagggttaaatcaacatattttggcttcaaatatttcacttctccgagcgacagaa
gttgaggatattatagaaggcagagaagaaaagtaccgtgctgtttctgttcaaaccatt
gaaccgctgttccccaaagatcctaaagctaaaaaacccattccatgggttccagctatt
ccaaatagttctcacttggatgctgttcctcaagcaacatgcatcaacagaaatagatta
gggcctaagaaagtccgaacatttcctctctgttttgatgacacagatccagctggagtt
catgaaaacagtaaccaactagagcttttggtacccattcggctagacatggagattgaa
gggcaaaagttaagggatacatttacatggaacagaaatgagacattaattactccggaa
caatttgctgaggtcctctgtgatgacctagacttaaaccctataactttcgttccagca
attgctcaatgtatacgacagcagcttgactcgttccccgcagaaggggaagctcttata
gaaggccaaactgaccaacgagtgatcattaagctaaacattcatgtcggaaatatttct
ttggttgatcaactcgagtgggatctaagtgaaccaaataatagcccagagcaggtggct
ttgaagatctgtgctgaattaggtcttggcggtgaatttgtaaccgctatcgcatacagc
gtccgtggtcaactttcttggcaccagagaacatatgctttcagtgaagctccgctttct
tctgttgaattgccattccgcccccaagctgaagcagaacagtggtctccattcatcgaa
acactgacggatgctgagatggagaagaaaattcgcgatcaagatcgtaatacaaggcga
atgcgacgcttggccaacgctaccccttggtag

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