Daphnia magna (water flea): 116917458
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Entry
116917458 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
dmk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116917458
04120 Ubiquitin mediated proteolysis
116917458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116917458
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116917458
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116917458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
DUF2039
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
Zn_ribbon_6
zf_RING_Vps8_fungal
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116917458
NCBI-ProteinID:
XP_045026153
LinkDB
All DBs
AA seq
806 aa
AA seq
DB search
MLTDSHILGKYQYKSNQKAKSIMSSQRGNVSRTRKQKHTNTISYKNNKHGETPKTKALNS
LQICNVCSHCKDVLEWKIKYNKYKMLSAPAKCTKCQEKTVKQAYSILCQPCAEKLELCAK
CGKKEEIVCRPEPTVAEKAQMEAKFQMELKSLSERKRRTFLRYLDRLGKAKDEDDGEIES
GETKRKPTNWMEEAEKRLELLKLRVEKDGEDDDDEEDDDWDDFGSPDEDLINEKQSKMRI
ELVILGSLVLSTSVVGNAYYQKKQFYPSVVHITKSNPSMMVMYIQALVIVVLLGKLMKKI
FFGQLRAAEVEHLIDRSWYAITETCLAFTVFREDFSTKFVALFTVLLFLKAFHWLVEDRV
DYMERSPIISWLFHFRVTSLLLVLGVLDWHFIQVAYYATLTQGASVQLVFGFEYAILLTM
VAMVTVKYALHTYDINRENPWEDKAVFLLYAELAIGFIKVILYMMFMLIMIRVYTLPLFA
VRPMYLAMRSFKKALSDVILSRRAIRNLNTLYPDATTEDLANTDNVCIICREEMVTGAKK
LPCNHIFHATCLRSWFQRQQTCPTCRLEVLRAPGNPIGNPAPPAAANMRPPQQQAAPSPP
PLQAAANAPQAAPVQPPLPPFIPPHHPFNFPFPMPNIPQQAGANDARYVPDANGQRPVMP
PPFSLPPFMPFVVPPPRPPANLGALSDAELRAMEGQERRHLEARIRVLRDIQTLLDAAVL
QMNQYGILVARLEHESNNNTETVRSTGEEAPAASGQQAEEQQPGVSATSPPVENEVLTPE
EETNLSDQERLRRRRVQRFMNGGEQN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgttgactgattcccacatattggggaaatatcaatataaatcaaatcagaaggcaaaa
agcattatgagttcccaacgcggaaatgtgtctagaacaagaaaacaaaagcatacgaac
accataagttataaaaataataagcatggtgaaacacctaaaactaaagcattgaatagt
ttgcagatatgcaacgtctgttcccactgcaaggacgtactggagtggaaaataaaatac
aacaagtacaagatgctgagtgctcctgcaaaatgcacaaaatgccaagagaagactgtg
aagcaggcttactccattctttgccagccttgtgcagaaaaactagagttgtgtgccaaa
tgtggaaaaaaggaagaaattgtgtgtcgaccagaacccactgtagctgaaaaagcacaa
atggaagcgaagttccaaatggaactaaaatccttgagtgaaagaaagcgtcgaacattc
ttgagatatcttgatcgtcttggtaaagccaaggatgaagatgatggtgagatagaatca
ggagaaacaaaacgaaaacccactaattggatggaggaagctgaaaaacgcctagaactt
ttgaaacttcgggtagaaaaagatggagaggatgatgatgacgaagaagatgatgattgg
gatgattttggtagtccagatgaagacttaattaatgaaaagcaatctaaaatgcgtatc
gaattagttattctgggcagtcttgttttgtctacatcagttgttggaaatgcgtattac
caaaaaaagcaattttatccttcagtggttcacatcacaaaatccaatcctagcatgatg
gtaatgtacattcaagccctagtcattgtagttttgctaggaaagctgatgaagaaaata
ttttttgggcagctgagagctgctgaagttgagcatcttattgaccggtcatggtatgcc
atcacagaaacatgtttggctttcactgtgtttcgagaagatttttctaccaaatttgtc
gccctgttcaccgttctcctgttccttaaagcatttcattggctggttgaggacagagtt
gattatatggaaagaagtcccataatctcctggttatttcattttagagtaacatcattg
cttttggttttgggggttctggactggcatttcattcaagtggcatactatgccactctg
actcagggagcttcagttcaactggtatttggctttgaatatgccattctattgactatg
gtagcaatggtaaccgttaagtatgccctccatacgtacgatatcaaccgtgaaaatccc
tgggaggataaagccgtcttcttgctgtatgcagaacttgccatagggttcattaaagtc
atcctatacatgatgttcatgttaatcatgattcgagtgtatactctaccgctgtttgca
gtgcgaccaatgtacctagctatgagatcgtttaaaaaagcgctaagtgatgtaatcctt
tcacggcgagccattcgcaatctaaacacactttatcctgacgccacaacagaagatttg
gctaacacagacaacgtctgcattatttgcagagaagaaatggttacaggagctaaaaag
ttaccatgcaaccacatcttccatgccacttgccttcgatcatggttccagaggcagcaa
acttgcccaacatgccgactcgaagttttgcgtgcacctggaaaccctattggaaaccca
gctcccccagctgcggctaatatgaggccccctcaacagcaagccgcgccatctcctcct
cctctccaggcagccgcaaatgcaccgcaagcagctcctgttcaaccgccgctaccgcct
ttcatccctcctcatcatccattcaattttccgtttcccatgccgaacataccacaacaa
gctggtgcaaacgatgctcgctacgttccagacgcaaatggacaacgtcctgtaatgcca
ccaccgttttcccttcctccattcatgccattcgttgttccacctccgagaccgcctgca
aacctaggcgcactcagtgatgctgaattgcgcgcaatggaaggacaggaaaggcgacac
ctggaagcaaggatccgtgtgctcagggacatacaaactttgcttgacgcggctgtgctt
cagatgaatcagtatggaattctagtggcacgcctagaacacgaatccaataataacact
gaaactgtaagaagcaccggagaagaagctccagcggcatctggccagcaggcggaggaa
caacaaccaggcgtcagtgcaacttctccaccagtggaaaatgaagttttgaccccggaa
gaagaaactaacttgagtgaccaggaaagattaagacgtcgacgtgtacagagatttatg
aatggcggagagcaaaactag
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integrated database retrieval system
