Daphnia magna (water flea): 116917497
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Entry
116917497 CDS
T07514
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116917497
03041 Spliceosome [BR:
dmk03041
]
116917497
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116917497
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116917497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
FUBP_C
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
116917497
NCBI-ProteinID:
XP_032778858
LinkDB
All DBs
Position
LG2:13005300..13013979
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AA seq
776 aa
AA seq
DB search
MGDSVVVTTAQNNSPNSAFADAVQRAREVASKIQPDSGSLSDFDFERNGSSSTVKRPFSS
VSPSMENEPDAKRMAAAVAAAAAAAAANAADPFGALRSPGMQGRGPMMNMPAASMMNLGP
ISTEEVAVPDKMVGLIIGRGGEQISRLQAESGAKIQMAPDSAGLPDRTCTITGSREAIGR
ARELINNIVQTRGGPRDAGPPSVESMGGQHNVGIDLTLAPNVEVMIPGPKVGLIIGKGGE
TIKQLQERSGTRMVVVQDGPQQENEKPLRIYGDPQKVEHAKQLVYDLIAEKEMEVSAFSR
GQRFGSYGGGGPQQTIEVAVPRSAVGVVIGKNGEMIKKIQNETGARVQFQQGRDDNPEER
MCALTGTMNQIEDARQRIEELIESVLVLGESQARDSQMGRGRGRTGGSTGGSSMNGAPYG
RSPGGGSSTGGGWGEYGPGVGRSGGPSMGMARNGQDKVEYQFLVPSTKTGIIIGKGGETI
KQINQQSGAFCELDRRPPPNPNEKIFIIRGSHEQVELAKRMISEKLGLGPMGAPPTQGYP
MGQNQNAGAYAAQGWGAAAYQQWPGQPNDPSKADPNAANAAAWAAYYQQQQFYQQPGSGA
PSAQSGNPGQPESNSGSVPVNPQTGQPDYTAQWIQYYRSIGAMKDAEALEQQLKASKGMG
NTAVSAAPAAAPAAAPTQDYSAQWAAYYRSIGKIGEAEAIEAQARLKQSAQGGQGPGQAG
SAAQYGAYPGAGSGGSAAATAGYYGGQPGGGQPQGGAAAYGYQGYGGYGQAPSDGQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcggttgtagtgactacggcccaaaacaacagcccgaattctgcatttgcg
gatgccgttcaacgagcaagagaggttgcatcaaaaattcagccagattcaggaagcctg
tcagactttgactttgaaagaaacggttcaagctccactgtcaagaggcctttcagcagt
gtaagcccatcaatggagaatgaacctgatgccaagagaatggcagcagccgtggctgct
gctgcagcagcagctgcagcaaatgcagcggatccatttggagctttgagatcacctgga
atgcagggaagaggaccgatgatgaatatgcctgctgcctccatgatgaacctcggtcct
ataagcactgaagaagttgctgttccagacaaaatggttggactaattatcggacgaggt
ggtgagcagatttcaagactgcaggctgaatctggagctaaaattcaaatggcacctgac
agtgcaggcctacctgatcgaacttgcacaatcactggctcaagagaagcgatagggagg
gctcgtgaattgatcaataatattgttcagactcgtggtggacccagagatgctggacct
ccatcggttgaatctatgggtgggcaacacaatgtgggtattgacctcactttagctccc
aatgttgaagttatgatcccaggccctaaagtaggtttaattattggtaaagggggtgag
acaatcaaacagttgcaggagagatctggaacgaggatggttgtagtacaggatggccca
caacaagaaaacgaaaagccccttcgcatctatggtgaccctcagaaagttgagcatgca
aaacaacttgtgtacgacctcatcgccgaaaaggagatggaagtttccgccttcagtcga
ggacagaggtttggtagttatggaggaggtgggccgcagcaaactatcgaggtggcagtg
ccgcgatcggctgtcggtgttgtaattggcaagaacggcgagatgatcaagaagatccag
aacgaaacgggagcccgggttcagttccagcagggacgagacgacaatcccgaggaacgg
atgtgcgcgctgacaggcaccatgaaccagatcgaggacgccagacaacgcatcgaagaa
ctcattgaatctgtattggtgttgggggagtcgcaggcgcgtgatagccagatggggcgg
ggccggggtcggacaggaggaagtacaggcggcagcagtatgaatggagctccttatgga
cgaagccctggaggtggaagttcaacaggaggtggatggggagagtatggacctggagtc
ggccggagcggaggaccaagcatgggaatggcccgtaatggacaagacaaagtcgaatac
caattcctggttccttccaccaaaaccggaattattataggcaaaggaggcgaaacgatc
aagcaaatcaatcaacagtctggagcgttttgtgagcttgataggaggccccctccaaat
ccaaatgaaaagatcttcatcatccgtggatcacacgaacaagttgaattggctaaacga
atgatcagcgaaaaactaggattgggaccaatgggtgcgccaccgacacaaggatatcca
atgggacagaaccagaatgcaggagcatatgcagctcaaggatggggagcagccgcctat
caacagtggcctggacaacccaacgacccctctaaagcggatcccaatgccgcaaacgca
gccgcatgggctgcctattaccaacagcaacagttctatcaacaacccggaagtggagct
ccttcggcccagagtggcaatcctggacagcccgagagcaatagcgggagtgtccctgtc
aatccccaaaccggacaaccagattacacagcacagtggatacaatattacagaagtatt
ggagccatgaaagatgcggaagctcttgaacaacagctcaaggccagcaagggtatgggg
aatacggcagtgtcagcggctcctgcagccgctccagcggcggcgcctactcaagactac
agcgcacagtgggctgcatattatcgctcaattggcaagattggagaagctgaagccatc
gaagcccaagccaggttgaagcagagtgcacagggtggtcaaggtccaggtcaagcagga
tcagctgctcagtacggtgcctaccctggtgctggatctggtggtagcgctgcagccacg
gctggatactatggtggacagcccggcggtggccaacctcaaggcggagcagcagcctac
ggctaccagggatacggaggctatggacaagccccatctgatggacaatag
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