KEGG   Daphnia magna (water flea): 116917662
Entry
116917662         CDS       T07514                                 
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1B
  KO
K18757  la-related protein 1
Organism
dmk  Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116917662
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116917662
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 116917662
NCBI-ProteinID: XP_032779108
LinkDB
Position
LG2:complement(16649954..16656261)
AA seq 1144 aa
MATLTESTTVDSPSANGNHKETTSDSQKSGPPCQVISPKNPDINDENACSIEKATEEALK
EGSENKKFIEAPIPKVNPWTVNRAGSQQTGPLKPSSRHFLGRPLQQQRQQQPTVVKANIM
DRRKVNVKASDFSDVGDWPTLGEAAVAAAVVRPKEEIPTVTVSVVNKPRTWADEVIVEEL
EEGEIVENDERKKKHEITGRVEKALTPKKNLRRSTGEELEEGEIVSSDEEAHAPQITVRK
NDKKIIQSSPNNATSNNKDKRGVENKENRADKRKKGPKPRWVPLDIEPPSVRPKSQKNKS
SRSPKDVSNSTAQDGRRSAAKGEVKERRINGDQQESGGPQRNNRGMSGSGRAGRGRHRSR
GNALGRSRSAPHGDGIMEYSDFMAPIFSAGLADYGTQDSPFVTPFVGMAVGGVGLGHVPT
NVALLVPAVLQPHTKSVGDASVVKDLVRKQVEYYFSEDNLQRDFFLRRKMDSEGYLPISL
IASFHRVQALTQDVSLVIQALQQSSLLKIKDLVKVRTVNDPEKWPILPETIKSEEQPETI
MTSTGGSLKEKSVNTDTANSTMPEPEPAKVEVIKTDTMKVGPAKSKSPKNGPTKSEVVTT
NENEKTSLPKTNEEEWKEVKRRVRDRQSSVSSSSGILPYEAAVEEKIAGRSRQSSVSLSK
NTIGPKCEDREELDFQFDEELDRLPVVKQNTFTTDWSDSDDGEYDEVGDDFINKILIVTQ
SNRPTKHEGYDRTGDWTTRTKITQELVHDIEDGLRYYEQDLWNDHEWAPSVNPTSSFKTV
NLISREDFEKIAPKSQKQDIPQPPPPPPPSLRISSMPNRGRGRKQEVPRFYPVTKTDPIH
FDERTPRKRKTRHGENPPVECHVGWVVDSKEHRVRTTSVGSCDLGTSPAEKSSIAGSYGS
TPQSLPTFQHPSHALLKENGFTQQVYTRYRARCLKERKRVGVGQSPEMNTLFRFWSFFLR
ANFNRKMFDEFRRLALEDAAAGYRYGLECLFRYFSYGLEKHYRNELYQVFQEETIRDYET
GQLYGLEKFWAFLKYYKNGKKLSVDPKLKEYLSKFKTIEDFRVVQPADQRRSKSLGNRKR
SESESLGDARRFTKQSFHHQMTKRYGSGRIVHVSSDEPTAKNVNTAPKNNRRTRSQSFTD
NSTA
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggcgaccctgacagagtcgactactgtcgactcgccttcagcgaacggtaaccataaa
gaaaccactagcgactcacaaaagagtgggcctccttgccaagtaatctctcccaagaat
cccgatatcaatgatgaaaatgcctgttctattgaaaaagctactgaagaagcattgaag
gaaggaagtgagaataagaagtttattgaagccccgattcctaaagtaaatccatggact
gtcaatcgcgctggttcacagcagactgggccactcaagccgtcatcaagacatttccta
gggagaccactccagcaacaaaggcagcagcaacctacagttgttaaagccaacataatg
gataggagaaaagtcaatgtcaaggctagcgatttcagtgacgtcggtgactggccgacc
ttgggggaagctgccgtcgcagctgcagttgtacgtccgaaagaggaaataccaaccgtt
acggtttcggtagtcaataagcctcgcacctgggcagatgaggtcattgtcgaagaattg
gaagagggtgaaatcgtcgagaatgatgaaagaaaaaagaagcatgaaattacaggtcgt
gtggagaaagcccttacacctaaaaagaatctgcgtcgttccactggggaagagttggaa
gaaggagaaatagtgagctcggacgaggaggctcatgcacctcaaataactgtccgaaaa
aatgacaaaaaaataattcagtctagcccaaacaatgcaacttcaaacaataaagataaa
cgaggagtagaaaataaagaaaatcgcgctgacaaaaggaaaaaaggaccgaaaccccgt
tgggtgccgctcgacatcgaaccaccatcagtgcgaccaaagtcccaaaaaaataaatcg
tctcgatcaccaaaggatgtgtctaacagtactgctcaagatggacggagaagcgctgca
aaaggagaagttaaagaaaggagaatcaacggcgaccaacaagaatctggtggtccccaa
aggaataaccgtggaatgtccggctctggtcgtgcaggacgtggacgtcatcgatcacga
gggaatgcacttggtcgctctcgatcagcacctcacggcgatggaattatggaatattca
gattttatggcacccatattctcagctggattggcagattatggtactcaagactctcca
tttgtaactccgtttgttggcatggccgtcggcggcgttggattgggtcatgttcctacc
aacgtagctcttctcgttcccgctgttctacagccacatacgaaatcggttggagatgca
tcagttgtgaaagatcttgtgaggaaacaagttgaatactacttcagtgaggataatttg
caaagagattttttcttacgtcgtaaaatggactctgaaggttacctacctatatcgcta
attgcatcttttcatcgtgttcaagcattaacacaggatgtcagtctggttatacaagca
cttcaacagtcctctttgttaaaaatcaaggacttggtgaaggttcgaactgttaatgac
cctgaaaaatggcccattcttcctgaaacgattaaaagtgaagagcaaccagaaacaatt
atgacatccacaggaggcagtttgaaggagaaatctgtaaatactgacacagctaattcc
acgatgcctgaacccgaacccgctaaagtggaagtgataaaaactgatacaatgaaagta
gggccagccaaatctaaatcaccgaaaaatggaccaactaaatctgaagtcgtgactaca
aacgaaaatgaaaagactagtcttcctaaaacaaacgaagaagaatggaaagaggtcaag
cgccgtgttagagataggcagtcatcagtttcatcctctagtggaatcttaccctacgaa
gcggcagtggaagagaaaatagctggtcgatcgagacagtcatctgtcagcttgtccaaa
aatacaattggcccaaaatgtgaagatagggaagaactcgatttccaattcgatgaagaa
ttggaccgcctaccagtggtgaaacagaatacttttaccactgattggtctgactcagac
gacggtgaatacgacgaagtcggcgatgatttcataaacaagattttgatcgtcacgcaa
agcaatcggccaaccaaacacgaaggatatgacagaacaggagattggactacgcgcacc
aaaatcacacaagagctcgtacacgacatagaggatggattgcgttactacgagcaggac
ttgtggaacgatcacgaatgggctccatcggttaatccgacttcatctttcaagactgtc
aacttgatatcacgtgaagattttgaaaagatagcaccgaagtcgcagaaacaagatatt
cctcagcctcctccaccacctccaccttctctaagaatttcttccatgcccaatcgggga
agaggaagaaaacaagaagtgccacgcttttatccggttacgaaaacggatccaatacat
ttcgatgaacgcacacctcgcaaaagaaagacgaggcatggcgaaaatccacctgtagag
tgtcacgttgggtgggtggtagattcaaaagaacacagagtacgaacaaccagcgtagga
agctgtgacttgggcactagccctgcggaaaagagttcaatagcaggtagctacggtagc
acgccgcagtcgctaccgactttccaacatccatcacacgcactgctaaaggaaaatggt
tttacccaacaagtatacacccgctatcgtgctcgatgtctcaaagaacgtaaacgtgtt
ggagttggccagtcaccagaaatgaatacgcttttccgtttctggtcctttttccttcgc
gccaacttcaatcggaaaatgttcgacgaattccgtcgcctcgcactggaagacgcagca
gctggctaccgttacggcttggaatgtctctttcgatatttttcatatggtttagaaaaa
cattatcgcaacgaactctaccaagtcttccaagaagaaactattcgtgattacgaaacg
ggtcaactctacggtcttgagaagttctgggcatttttaaaatactataagaatggtaaa
aaactatcggttgaccccaaactcaaggaatatttgtcgaagtttaaaactattgaagat
ttccgtgttgtccagcctgcagatcaacgaagatccaagtcactaggcaacaggaaacga
tcggaatctgaaagcttgggtgacgctcgcagatttacaaagcaatcgtttcatcatcag
atgacgaagaggtatggttccggaaggattgttcatgtttcctctgacgaaccaacggct
aaaaacgtgaataccgctccgaaaaacaatcgtcgaacgcgttcacagagctttactgac
aattcgaccgcgtag

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