Daphnia magna (water flea): 116917884
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Entry
116917884 CDS
T07514
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116917884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116917884
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
116917884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
116917884
NCBI-ProteinID:
XP_032779382
LinkDB
All DBs
AA seq
228 aa
AA seq
DB search
MACIQSCTNRVGWPKTEIKTEMSSMKFNQGSLTLHRTINLYPLSNYTFGTKDPLFERDPS
VPARFQRMREEFDKVGMRRSVEGILLVHEHGLPHVLLLQLGTTFFKLPGGELNPGEDDIE
GLKRLLTEILGRQDGVVQDWLIEDSVGNWWRPNFEPPQYPYIPPHITKPKEHKKLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQTMSRFDFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcatacaatcgtgtacgaatcgcgtcggttggccgaaaactgaaattaaaacg
gaaatgtcctccatgaaatttaatcagggttccttgacgttgcatcgcactatcaatctg
tatcctttgtcaaattacacctttggaacaaaagatcctttatttgaaagggatccatct
gtccctgcacgatttcaacgaatgagggaagaatttgataaagttggaatgagacgaagt
gtagagggcatccttcttgtccacgagcacggtctacctcatgttttgttgctacagttg
ggaacaactttctttaaactgccaggaggagagttaaatccaggagaagatgatattgaa
gggctaaaaaggctacttacagaaattctaggccgacaagatggtgtggttcaagattgg
cttattgaagattcagttggcaactggtggcgaccaaattttgaaccaccacagtaccca
tacataccccctcatataactaaaccaaaggagcacaaaaaacttttcttagtacaacta
caagagaaagctcttttcgcggtacctaaaaactacaaactcgtcgcagcaccacttttt
gaattatatgacaattctcaaggatacggtcctatcatttcgtcccttccgcaaacaatg
agcaggtttgatttcatttacatgtga
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