KEGG   Daphnia magna (water flea): 116917903
Entry
116917903         CDS       T07514                                 
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03013  Nucleocytoplasmic transport
dmk04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116917903
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    116917903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116917903
   04131 Membrane trafficking [BR:dmk04131]
    116917903
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116917903
Membrane trafficking [BR:dmk04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    116917903
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Ge1_WD40 Beta-prop_WDR19_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 116917903
NCBI-ProteinID: XP_045035881
LinkDB
AA seq 380 aa
MYCVAFWKFVCCFCFSRYLSTRTINAEHKDLIHDVAYDFYGRRLATCSSDQSVKVFDLDE
NDEWRCTADWKTHAGSVWKVNWAHPEFGQILATCSFDRTAAIWEEIVGESGNSTQSKNQS
HWVKRTSLVDSRTNVTDIKFAPKHMGLLLAMCSADGGVRIYEAPDIMNLSQWSLQQEITL
KMPVSCLSWNPSFSRLHPPMLAVGSDDTNVASGGKVFLFEYSESSHRWSKAETINTIVDP
VHDIAFAPNLGRSYHILGIASKDVRIVILRPPQKDAFAACSTSQLEILQAAQFDDHHSTV
WRISWNITGTILASSGDDGCLRMWKANYLQNWKPIAVLKGDGSGVTPEEATDREKTIGSG
ATARYFKLGAISNPNQVPWH
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtattgtgtcgctttctggaaatttgtctgctgcttctgttttagtcgttatttgtca
acaagaactattaatgccgaacacaaagaccttattcacgatgtggcatatgatttttac
gggcgccgattggcaacttgttcctctgaccagagcgtaaaagtttttgatttagatgaa
aatgatgaatggagatgtaccgcagattggaagactcatgctggctcagtttggaaggta
aactgggctcatccagagttcggtcaaattttagctacatgttcatttgatagaactgct
gcaatttgggaagaaattgttggtgaatctggaaattcaacacaaagtaaaaatcaaagc
cactgggttaaacggacgagcttagtagattcacgaactaatgtaacagacattaaattt
gcaccaaaacacatggggcttttgctggccatgtgttcagctgatggtggtgttagaata
tacgaagctcctgacatcatgaatctaagccaatggagtctgcaacaggaaataaccctt
aaaatgccagtttcgtgcctgtcatggaacccttccttttcccgactacatccccccatg
ctagccgttggtagtgatgacaccaatgttgcatctggtggaaaagtgtttttgttcgag
tatagtgagagctctcatcgctggtctaaagcagaaacaatcaacactatcgtcgatcca
gtgcatgacatagcattcgccccaaacttgggaagaagttaccatatactggggattgca
agcaaggatgttcgaatagttattttaagaccacctcagaaagatgcatttgccgcatgc
tcgacatctcagttggagatactgcaggcagcacagtttgacgaccatcactccacggtt
tggagaatttcttggaatatcaccggaactattttagcctcttcaggggacgatgggtgt
ctaagaatgtggaaagccaattatttgcagaattggaaacccatagctgttttgaaaggt
gatggttcaggggttactccagaagaagcaactgatcgggaaaaaactattggttccggt
gctacagcacggtactttaaacttggtgccattagcaacccaaaccaagtaccctggcat
taa

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