Daphnia magna (water flea): 116917914
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Entry
116917914 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116917914 isoform X1
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116917914
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116917914
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_FBXL18
F-box
F-box-like
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
116917914
NCBI-ProteinID:
XP_032779422
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Position
LG2:complement(8604602..8607938)
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AA seq
705 aa
AA seq
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MDSNEEKCDILRLPSELLLLLMELLSGKDVINFSLTCSRFLHVSRNFLRLLRFENCWMTG
ISVGDFKAHLTLSVDPFQLTECSFNNCYWLPAILLQNFIKKCENIEVLKISETKLNCGHL
AHIFGKCKRITHLSMTLSHDDLKLTQKSGKNVSQPSTDVILQQTCLKDCYDSMQKLIQLE
LVLFHSSLRELTIFLSFCDNLKELTLVPVKDQDPSIHMNSPFSEVKGKFVLNSLVVVNME
EDSGGLRIPQQSSKRRYQEYLVFKTDMRHLKNHWNDASPCPVINDRFSSLTFKHLRIPRG
MFEVWWIEKNVPSRTANSTDRELKADGWYMNDPLENIDLESIRNVREPFPVFIKKGLKAP
NARLISCFYSDQGFSDFCLNHPHLKALKLKALPVYDDWGNAMLQTKNQVVGEEWYSNSWE
NLAGLQAFSVEPSLLAVDHKRERPTRKRKFGEPFYNAAESNPIVHLPVLGVVFKSCLQIE
ELEIGVFTDVSETFRIDGEDLAQITQCKLLRKLTLASFNIVEGVFLEEVLKECIHLESLR
LKNLGSPLLCCYTKHLCAALPSARKLNTLSIFQRNMVPLAKLLDSIEQCSALTRLGLVAP
SDAAPFKWSAGVLTQRVIELCMKLQNLVAFFCVMNIPKSHKATVIKQLLHVMSPRRPSFC
VDIQASDKNSLDHESFSLPLVHREVLVHCNSRIGVVPYDFKSFLL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggattctaatgaagaaaagtgtgacattctacgtttaccttctgaactgttgctcctt
cttatggaacttctgtcgggaaaggacgttataaacttttccttaacttgtagtcgattc
ttacatgtctcgcgcaattttctcagattgcttcggtttgaaaattgttggatgacagga
atctcagttggagatttcaaagcacatctgacccttagtgttgatcctttccagctaaca
gaatgtagctttaacaattgttattggcttcctgcaatcttgcttcaaaacttcataaaa
aaatgtgaaaatatagaagtgcttaaaatttcagaaacaaaacttaattgtggacatttg
gcacatatttttggaaagtgtaaaagaattactcatctatcaatgacattatcccatgat
gacctcaagttaactcaaaagagtgggaaaaatgtttcacaaccatccactgatgttatt
ctccagcaaacttgtctgaaggactgctatgacagtatgcagaaactcattcaattggag
ttagttctgtttcattcatctctcagagagttgacaatatttttaagtttctgtgacaac
ttaaaggagcttacattggtaccagtaaaagatcaagatccaagcatccacatgaacagc
ccattcagtgaggtgaaaggaaaatttgttttgaattctttggtggtggttaatatggaa
gaagacagtggagggttgcgaataccccaacaatcgtcaaagcgtagatatcaggagtat
ctggttttcaaaacagatatgagacatctgaaaaaccactggaatgatgcttctccctgt
cctgttatcaatgataggttctcttccttaacgtttaaacacctgagaattccaagggga
atgtttgaagtttggtggattgaaaaaaatgtacctagtcgcacagcgaattcgaccgat
cgtgaattaaaggctgatggatggtacatgaatgatccactagaaaacatagacttggaa
agcatcaggaatgtgcgagaacctttcccggtgtttataaaaaaagggttgaaggcccct
aatgctaggttgatttcctgcttctactctgaccaaggattctcagatttttgtcttaat
caccctcatctcaaggcactgaagttgaaggcgcttccagtatatgatgactggggcaac
gccatgttacaaacgaagaatcaagtcgttggagaagaatggtattcaaactcttgggag
aatctcgctgggctccaagctttctccgttgagccttccctattggctgttgatcacaaa
cgagagaggccaacgcgaaagcgtaaatttggcgagccattttataatgctgctgaatcg
aacccaattgtacatttgcctgtcctcggagtagtctttaaaagttgtttgcaaatagaa
gaactagaaattggggtcttcacagacgtaagtgaaacgtttcgcattgatggggaagat
ttggctcagataacgcaatgcaaactgcttaggaaactgacacttgctagctttaatatt
gtcgaaggggtatttttggaagaggtattaaaagaatgtattcaccttgagagcctaagg
ttgaagaatctcggatcgcccctcctgtgttgctatacgaagcatctatgcgccgcgctt
cccagtgctcggaaactaaatacattaagcatctttcagcgtaacatggttcctctggca
aaattgttggattctatcgagcaatgctccgcacttacccgtttgggattggttgctcct
tcggatgcagcacctttcaaatggtctgccggtgttcttactcaacgggtcattgaactt
tgcatgaaactacaaaatctggtggccttcttttgcgttatgaatattccaaaatctcac
aaagctacggtgataaaacagcttctacacgtgatgtctccaagaaggcctagtttttgt
gttgatatccaggcctcggataaaaatagtcttgatcacgagtcgttttcattacctctt
gtacaccgtgaagttctagttcattgtaatagccgaattggcgttgtgccttacgacttt
aagtctttcctattgtaa
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