Daphnia magna (water flea): 116917915
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Entry
116917915 CDS
T07514
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116917915
03015 mRNA surveillance pathway
116917915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116917915
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116917915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
116917915
NCBI-ProteinID:
XP_032779424
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All DBs
Position
LG2:5159929..5162605
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AA seq
733 aa
AA seq
DB search
MRAGLQIILHFLRSIFVCETCSEMSDNNEHEMVESPLKETMTLLSRTPKGQIVYDRDPLE
PIKQSTSNSKSGVLLSENIFGRNPAHSPEKSIDSQYFQHQYSVHHPHPGLNNRPNLLMDI
PVQHTEKSINQFKWQQELLMMRNTNQLDETTPVYNLSNHGIMQLFELREQQRLSTATSFM
KKIEDFKEVSRRSDEEECLRMKQELEERLVPKRESQVDVEMIIQRLQVEARKRFQQEEDQ
IDQKLKEITSIQEKELQEDMKKKTLELHIAEAKRRKGISSSKLESLLKFLDESVTSCQER
DSFLQTVQMKLDRVTALKTQFQVVVNNVNHEDPLNSAIRSENIVKQIEDLVEVIRDDIAK
NNAIVEEKNVLSKRQQPQSALPSSAVMPITSSAVKQEHRNDQLGCLEKKTCDSNGGDEDL
DFVRREDLVVYSQLQAELRQYEANTVAFSGDLSLKTLRFELQKAVLHPVNEISDQSGQHL
QDKLDRLRSLLQGNAVHVGSRMVRATEHPGGLEYCTNLLARRLVAQGEDQVNVNPKAAFP
IAAIITELWLEFPVFGRLVLAHFYRQCPYLVPYYLPQQEGQSNEDYYKSLGYRYSSGKVE
QQPTYLKRMSGVVRLYAAVLISLPRRNQPHPHGLEHAWRYLAALLNLSPRNDITAAILVE
FLTVAGYAMSKEYGKQFQKLLHLICTEYFTMIRNVTPKGSGGGPVTRLEEFLHESITKGG
ISPPAGQLSPRFW
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaggtttacaaattattttacattttttaaggtctatcttcgtttgtgaaact
tgttcagaaatgagtgacaataatgagcacgaaatggtagaatctcctttaaaggaaacc
atgactttattaagtagaacgccaaagggacaaatagtatatgaccgtgatcctttggaa
cctatcaaacaatcaacgtccaatagtaaatccggtgtccttttgtcagagaatattttt
ggccgaaaccctgctcattcaccagaaaagtcaattgatagtcaatactttcagcatcag
tactctgtacatcatccacatcctggtttgaataacagacctaacttgttaatggatatt
ccagtacagcatactgaaaaaagcatcaatcagtttaaatggcaacaagaactcttaatg
atgcgcaatactaatcagctagatgaaacaacaccagtctataacttgagcaatcatggg
attatgcaactgtttgagctaagagagcaacagcgtttgtcaacagcaactagcttcatg
aaaaaaatagaggatttcaaagaagtttctcggagaagtgatgaagaggaatgtctacgg
atgaagcaagaacttgaagaaagactagtgccaaaacgagagtcacaggtagatgttgaa
atgatcatccaacgccttcaagttgaagcaaggaaacgatttcaacaagaagaagatcaa
attgatcaaaaactaaaagaaataacgtcgattcaagaaaaagagttgcaggaagatatg
aagaagaagacgttagagttgcacatagcggaagcaaaacgacggaaaggaataagttct
agtaaattggaatcgctactgaaatttcttgatgagtccgtaacctcatgccaggaaagg
gattcttttcttcagactgttcaaatgaaactcgaccgcgtaactgctttaaaaactcag
tttcaggttgttgtgaacaatgtaaaccatgaagatcccctgaacagcgcgatacgcagt
gaaaatatcgttaaacagattgaagatcttgttgaagtcatcagagatgatattgcgaaa
aataatgccatcgttgaagagaaaaatgttttgtctaagcgtcagcagccacagtccgcc
ttaccttcttcagcagtaatgccaattacctcttctgcggtaaagcaagaacatcgaaat
gatcaactaggctgtcttgagaagaagacctgtgactcgaacggaggagatgaggacctt
gatttcgttagaagggaagatttggtagtgtattcacaactgcaagctgaacttcgccag
tatgaagccaacactgtggccttttccggtgatttgtcactgaagacattgagattcgaa
ttacaaaaagccgttcttcatcctgtcaacgaaatatcagaccagtctggacagcacctt
caggataagctcgacagactcagaagcctcttgcaaggtaacgctgtgcatgttggttca
agaatggtaagggctactgagcatcctggaggattagaatattgtactaacttgctggcg
agaagattggtggctcaaggagaggatcaagtgaatgttaatccaaaggcagcttttcca
attgctgccataattaccgaactttggttagaatttcctgtttttggtcgcttggtactt
gcccatttttatcgccaatgtccgtaccttgtcccatattatttaccccagcaagaaggt
caaagcaatgaagactactataagtctttagggtacaggtacagtagtggaaaagtggag
caacaaccgacgtatctgaaaagaatgtcgggggttgtacgtctgtatgcggccgtttta
attagtttaccaagacgcaatcaacctcatcctcatgggttagaacatgcctggagatac
ctagccgctcttctcaatttatcaccgcgcaacgatattactgccgctattttggttgaa
ttcttaactgtagccggttatgcaatgtcaaaagagtacggtaaacagttccagaaattg
cttcatctgatctgcaccgaatattttaccatgatccgaaacgttacccccaaaggttca
ggaggaggtccagttactcgacttgaagaatttctacatgaatctatcacaaaaggaggc
atttcaccgcccgccggacaactttccccccgattttggtag
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