Daphnia magna (water flea): 116917952
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Entry
116917952 CDS
T07514
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116917952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
116917952
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116917952
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116917952
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
116917952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
116917952
NCBI-ProteinID:
XP_045025929
LinkDB
All DBs
Position
LG2:complement(8628157..8633376)
Genome browser
AA seq
1370 aa
AA seq
DB search
MSNSEVQEPKMDVENSQFCVNIFCVMPSNSTEATCPKDLFQAHECCKENGFNVNWIQEEA
CMKLKPCKEDVFILSEFVGPLFEFLRHFRCTIIGPQCLLVSVNKGEPLPDVPTPVFTVAM
KGIIVTTTGCSPQEKKDIQEKVQFMGGLYSSAFSVNVTHLIVKSVADFSLKFKVAISRDV
PVMVPNWVDAVWNASIKESVHGTDPMFARYACPPFQGLVICVSQIPIKDREALKKIIEAN
GGRYSGQLEMGKTNILITTSAEGEKYTYARRWKIRCLKPEWIHTSLNKGYAVDPDAFIVE
KSALPPRCSTPEADHSVMKFGNSSINSTILNESRVQQIDETVGSTTLILNHQQCDLRSSE
ALESLDLAISKKAGPFLDGCKVFLSGFDGSPMEKLRRILNNAGVARFNSISESLSHVIVG
KTVEEDWKQLQQLMHKPHIVTVEWVVQSLRLKRAAPEAAYLHPDFKKVIAPNKENAAKKP
IRELSSNLQEDTHMVQQYLTTDHTEEEASSLMDRPQGIFSGLTFQLVNLDTDFVSTMTDL
IVSNGGLVVLKNATYVVTEPVSHTIVPLDQVAKGTLVNTLWIEECVDEGRLVDIEFYHHH
IKVRDRQILAGYTVSFSGIQGRLRELLDDLIGQLGGRPQETFSRKLMEQKNVYRSTHLVC
AKTEGRKYEKALEWGVPAVSAEWVIACATSSSRPNEDDFPPTGEAPKSPEPDVPTPQTAI
KLSVCPTESVVLKTTKQKLAEISSNPTRHLPTHFDMSSPRTPTGPSVTPVMPQPPAAFDS
PMCMQPSSSGTNTVGRTPQPRTTLFNMPTPDTPYGRLLNSDPSPDTRKMWKHALENRVRL
TPRTNESFTTTPQQEIQRGEIIVASEASDYFENLRKKFRLDNGEDGQTTWGSASPAAVPP
LEPPKQPFDGIVVFIHKKIEDQRSELVRAVETLGGKVRFQHCEEVTHFVYQGKLAASKEV
KNAKEWHQKFVSPQWILDCEDATFRLEESQYPPSLNPKMALSLNFNSQPPPPASCTQKRR
PIANIVETGTPKIPIRKRLTSDIDTHENDHHLEVDEGQNLPVPEVDEEACKELLQLDQVL
SRSAEQIPVVKLANVSAARNGRAPDRVFVPATQPLDMAPDSQSAAVVWDLHETQKITGSE
PAPVYRVMFSGMAQDDRDCCTAIIENLGGTVLEANHYDPTCTHLVVAKVGSNEKLLTSIA
AGKWILHPEWLSESEKEHRFLEEQKYEWGNPEASAVHPQVESISEDEAKIAAAAYYWRIN
RTRGHSDGPFHGITAVLHLREKNASFQRLLEAGGGEVVDPISALENSRTNLCILDTREVK
KIQLATYASKGIYCVPLIYLRNLVLATDKKLKWSKSVLPEFLPYLENMPS
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagtgaagttcaagaacctaagatggatgtcgaaaacagccaattttgtgta
aatattttttgtgtaatgcctagtaattcgactgaggccacctgtccaaaagacttattt
caagcacacgaatgttgtaaagagaatggtttcaacgtgaattggattcaagaagaagct
tgcatgaagcttaaaccttgcaaggaagatgtctttattttgtctgaatttgttggacca
ttgtttgagtttctcagacacttcagatgtaccattatcggcccacagtgcctgcttgtt
tctgttaataaaggagaacctcttccagatgttccaacaccagttttcacagttgcaatg
aagggaatcattgttactacaacgggatgcagcccccaagagaaaaaggatattcaagaa
aaagtgcaattcatgggtggactttactcatcagcgttttctgtaaatgttactcatctc
attgtcaagagtgtagcagattttagtttaaagtttaaagtggcaataagcagagatgtt
ccagtcatggttccaaattgggttgatgctgtttggaatgccagcataaaagaaagtgtc
catggaacagatcccatgtttgctagatatgcttgcccccccttccagggattggtcata
tgtgtgtctcaaattccaatcaaggatcgggaagcccttaagaagattatcgaagcaaat
ggcgggcgatactctggtcagctcgaaatgggtaagacaaatattctcatcaccacatca
gctgaaggggaaaaatacacctatgccagacgctggaagatacgttgcctcaaaccagag
tggatccatacttcattgaacaaaggctacgccgtcgacccagacgcattcattgttgaa
aagagtgcgttgcctccgagatgttcaactccagaagcagatcattctgttatgaagttt
ggtaattcaagcatcaacagtactatattgaacgaaagcagagttcaacaaatcgacgag
acagttgggtctacgactttaatactgaatcatcaacaatgcgaccttcgatcttcagaa
gctcttgaatcgctagatttggctatttcgaaaaaagcagggccttttctggatggctgt
aaagtttttctaagtggttttgatggttccccgatggaaaaacttcggcgtattcttaac
aacgccggcgtggctcgctttaatagcatcagtgaatcgctatctcacgtcattgtcggt
aaaactgttgaagaggactggaagcaacttcaacaactaatgcataagcctcatatcgta
acagtagaatgggtagttcagagcctaagattgaaaagggctgccccagaagccgcttat
ctgcatcccgatttcaaaaaagtaattgctcccaataaagaaaacgcggcgaagaaacct
attcgtgaactgagtagtaacttacaagaagatacacatatggtccagcaatacttgact
acggatcatacagaagaagaagcgtcatcattaatggatcggcctcaaggcattttttcc
ggtcttaccttccaacttgtaaaccttgacacggactttgtttctaccatgacggaccta
atcgtaagcaacggtggtcttgtcgtattgaagaatgccacctatgtggttacagaacca
gtcagccataccatagtgcctttggatcaagtagcaaaaggcacgttggtcaatactttg
tggatcgaagaatgtgtcgatgaggggcgcctggttgatatcgaattctatcatcaccac
attaaagtacgagacagacaaattctagcagggtacaccgtatcattcagtggcattcaa
gggcgacttagagagctgctcgatgacttaattgggcaacttggcggaaggccacaggag
actttctcccgcaaactgatggagcaaaagaatgtatatcgttctactcatcttgtctgt
gcaaaaacggaagggagaaaatacgaaaaggctcttgaatggggtgtcccggctgttagt
gccgaatgggttattgcctgcgctacttctagcagtcgacctaacgaggatgattttcct
ccgacaggtgaagcacctaagtcgccagagcctgacgttcctacacctcaaacagcaatt
aaactatctgtttgtcctacggagtccgtagttttaaaaacgacgaagcagaaattggca
gaaatatcaagtaatcccacacgtcatttaccgacgcattttgacatgtcttcaccgcga
actccgacaggaccctcagttactcctgttatgcctcaaccaccggctgcgtttgattca
ccaatgtgtatgcaacctagttcaagtggtaccaatactgttggcagaacacctcaacct
cgaacgactctatttaacatgccaacgccagatacaccatatggaaggcttttaaactcg
gacccgtcacctgatacccggaaaatgtggaagcatgcattggaaaaccgggttcgtctg
acacctcgtacaaatgaatcatttaccacaacgccacagcaagagattcaacgaggagaa
attattgttgcttctgaagcttcggattattttgaaaatttacgtaaaaaattccgactt
gataatggagaagatggacaaacaacatggggatcggcaagtccagcagcagttccaccc
ttagaaccaccgaagcaacctttcgacggaattgtggtttttatacacaagaaaatcgaa
gatcagcgatctgagttggttagggctgttgaaacgctgggcggcaaagttcgttttcag
cactgtgaagaggtaacgcattttgtttatcaaggcaagttggctgcttcgaaagaggtt
aaaaacgccaaagagtggcaccagaaattcgtctcccctcaatggatactcgactgcgaa
gatgccacgtttcgcctcgaagaatcccaatacccaccctctttaaatccgaaaatggct
ttgtcactcaattttaattcgcagcctcctccaccggctagctgtacgcagaaacgtcgc
cctattgcaaacattgtcgaaacgggtacaccaaaaatcccgatccgtaaacgtttaacg
tccgatatcgatactcatgaaaatgatcaccaccttgaagtagacgagggacaaaacctt
cccgttcctgaagtagacgaagaagcatgtaaagaacttttgcaactcgaccaagtccta
tcacgttcagctgagcagatccccgtggtaaagctggcgaacgtatcggcggctagaaac
ggtcgggctcccgatcgtgtctttgtccctgctactcaacctttggacatggccccggat
tcacaatcagccgcagtagtgtgggaccttcatgagactcagaagattactggttcagag
ccagcccccgtttaccgagtcatgttctctggaatggcacaagatgaccgtgactgctgt
acagccatcattgaaaatttaggtggaacagttcttgaagccaatcattatgatccaaca
tgtacccaccttgtcgtcgctaaagttggatctaatgaaaaactgttgacatccattgct
gccggcaaatggatccttcatcccgagtggttgagcgaaagcgaaaaagagcatcgtttt
ttagaggaacagaagtatgagtggggtaatccagaagcatcggcggtgcatccacaagtt
gaatctatttctgaagatgaagccaaaatcgcagcagccgcttattattggcgtattaac
cgtacccgtggccattccgatggcccttttcatggcattactgccgttctccacctacgt
gaaaaaaacgcatcattccagcgtttgcttgaagctggtggcggagaggtggttgatcct
atctcggctttggagaacagcaggacaaatctgtgtattttggacactcgggaggtaaaa
aaaatacagttggctacatatgctagcaaaggtatctattgtgttccactgatctatttg
aggaaccttgttctcgcaacggataagaagttgaaatggagtaaatctgttttgcccgaa
tttctcccttatctagaaaatatgccttcttga
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integrated database retrieval system
