Daphnia magna (water flea): 116918159
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Entry
116918159 CDS
T07514
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116918159
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116918159
Surveillance factors
Other surveillance factors
116918159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
116918159
NCBI-ProteinID:
XP_032779661
LinkDB
All DBs
Position
LG3:13847732..13853498
Genome browser
AA seq
1468 aa
AA seq
DB search
MSTTTAKPLKMSDTALKFGPEWLRALSHGDTAVSPPPSPSLGAPRYKLAQHRYGREEMLA
LYDKMMKAPDDLTTAPPIYIEKTQTPLALIQMSDEEMRMWQRGVNSDVVLKQMGRSAGPP
VGGSGPAVGAGASRGRGGGSVDRGRGRARGVGPAVGSYNRGTSYEDGGDPGEHGNRREGP
PTGYGRGTTRHFERSQSSSERVWIERPERNGGGAESETWNGSASPRKEFGAARPAAGDNN
WRSREAMRERAERAENKEEEDGWRTAGRGERWGRAGWRSDREGGEREPPGIGEKRDPWVE
GSSSGGGVGGSGVGTGERSEKAHRTWDEDGRPTGGSGYYSNSKGGGGSRGGHHPNRRGWD
ENDSLPEWVAEEHLQGGGTFDSSGAFRDERWSDEDDGDGKKRRVLRKRVDPSHDGIAGAE
DSGGNGTAVAVDSPSKASDDVQEQQLPDESVPTAVAVQAGAQQTTNVISSTPPVQRGPSP
ESTLSSQPTRVEEDGLEHAQSVVSTLVAQLVEDEDQPKPSLSPPNPPLNLSMDQWFYRDP
QGEVQGPFTTAEMSEWFNSGYFTMALSVRRACDERYAQLGELTKMWGRLPFMPGPPIPPI
KNSDLHPMVSAEQEKLQMLQQQLIQQQMFQQQIMQQQHMLRQQTIIAKLSQMDGWNTLSP
IQQQQVVNQHMANMPHPIPGDPLFQQLRLQMEAQAKLQAEMIQLQRSKEQQQQSVGVHSL
VSHLNQLQQQPQPVLEQQALANNSMKSHDPIQVFLQQLLGQSKSPPAAISKPSTSNIMNN
HKPHESQVVLDPIQSLIQQAQWNANHAAAQGVVDPAMGNHVAPGFHGLPPGVGVPWPAHN
HSALFQTGSSESQPAMTSVWDLENAKVEEAKRQMEQQQHQQQMAAEMHRRELEEKRMKEE
EEERRRRLEIQEREEERIRIEEMRRETERQQQAEEMRRRELAQQQQLQAAEEKRRREEEK
RKREEELKQQQIEEERIRREEERIRKEEEKAAEQHRRQQEALQRLQEQQAVAQAQARAAA
AAQQQAAAAAAAAAAAAQQQAQAQAQAKAAQAMMAPWAQQQQQQQQQQQQTGESLSMAEI
QKLQEEKEAKERAVAQAQKAEQTARAAALLQQQQQQAAIKLRWAKQNTPSPSNAKSLAEI
QAEEAAQLAQQKEKEAKEKANQQVNMAHLNLAAASAWGSSHHGNSAWTSGRTAAAVVGQH
QPAPPAQPTATTTAAKTNHSTSTNADWKAGLTVGFWEEPISTPSAASKAASKATPSHQQQ
QQTAAKSTSGAKSASAATKQPQQATAAKQPAVSKTVASTTTSSNNKNRSNKEEEAVRKLF
NQTAAAAEKKDSFSQWCFEYLKKVQAQIDVPTFVAFLKDVESPFEVQEYVRLYLGEGKDA
KEFAKQFLDQRSRWRQMQRNVQQYEEDNMCIPAKAINPGQSSDFHEVKSKSKKSKKKMQK
VDASLLGFSVSASTDRINVGERDFVDGM
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaccactgcgaaacccttgaagatgagtgacactgcccttaagttcggacct
gaatggctcagagctttatctcatggagacactgcagtatccccaccacccagtcccagc
cttggagcaccccgatacaagctggcccaacaccggtacggaagagaagaaatgctagcc
ctatatgacaaaatgatgaaggcccctgatgacttaaccacagccccacccatctatatt
gaaaagacacaaactccccttgcacttattcaaatgtctgacgaagagatgcgtatgtgg
cagcgaggagttaacagtgatgttgtcctaaaacaaatgggtcgaagtgcgggtcccccg
gttggaggcagtggtccagcggtgggagccggagcttctcgaggtcgaggcggcggaagc
gtagaccgtggacgaggacgagctcgtggtgtcggtcctgcagttggatcatataatcgt
gggacaagttatgaagacggaggagatccaggagaacatgggaatcgtagagaaggtcca
ccaactggttacggaagaggaactactcgccattttgagagatcccagagttcttctgag
cgtgtttggattgagcggcccgagagaaatgggggtggagccgagtcagagacgtggaac
ggctctgcaagcccgcgcaaagagtttggcgccgcccgccctgccgccggcgacaataat
tggcggtcacgtgaggccatgagggaacgcgctgaacgggctgagaacaaagaagaagaa
gacggttggcgaacagctggccggggagaacgctggggtcgagctggctggcgttctgac
cgcgaaggtggggagcgtgagccaccgggtatcggcgagaaacgtgatccatgggtagaa
ggtagcagtagcggaggaggagtgggtggaagtggcgttggtactggagaacgttcggaa
aaagctcaccgtacgtgggacgaggatggtcgtccgacgggtggttctggctactactct
aatagcaagggtggtggtggtagtagaggcgggcatcaccccaatcgccgaggttgggat
gagaacgattcacttcccgaatgggtggcagaggaacatttacaaggcggaggaacgttt
gactcttctggagctttccgcgacgaaaggtggtcagatgaggatgacggtgacggcaaa
aagaggcgcgtgctacgaaagagggtcgacccctcacatgacggaattgctggagctgaa
gatagcggtggcaatggcaccgctgtcgccgtcgattctccatcaaaggcttcagacgat
gtacaagagcagcaactacccgacgaatcggttcctactgccgttgctgttcaagctggc
gcgcagcagaccactaacgttatcagttcaactcctccggtccagcgtggtcctagcccg
gagtctaccttatcatctcaacccactcgtgtggaagaggacggtttggaacacgctcaa
tccgtcgtttctacgctggttgctcaattagtcgaagacgaagaccagcccaaaccatcg
ctcagcccgccaaaccctccgctgaatttgagcatggaccaatggttttacagagatcca
cagggtgaagtgcaaggtccttttacaacggctgaaatgagcgaatggttcaatagcggt
tatttcaccatggcgttgagtgtccgacgtgcctgtgacgaacgttacgcccaactgggc
gaattgacgaagatgtggggacgacttccttttatgcctggccctcccatcccgccaatt
aagaattcggatttgcatccgatggtgtcggctgaacaggagaaattgcagatgcttcaa
cagcaactcattcaacagcaaatgttccagcagcaaataatgcagcaacagcacatgctg
aggcagcagacgatcattgcgaaactgtcacaaatggacggctggaacacgttgtcgcca
atccagcagcagcaggtggttaaccagcatatggctaacatgcctcatccgattccgggc
gatccgctctttcagcaattgcgacttcaaatggaagctcaagccaaacttcaggctgaa
atgattcagctccagcgcagcaaagaacaacagcagcagtctgttggagtgcattcttta
gtcagccacctcaatcagcttcaacagcagccacagccagtattagaacagcaagcactt
gccaacaactcgatgaagtctcacgatcccattcaggtgttcctccaacagttgttgggg
caatcgaagtcacccccggcagcgatctcgaagccgtcaacaagcaacatcatgaacaac
cacaaacctcacgaatcccaggtagtcctggatccgatccaaagcctcatccagcaagct
cagtggaacgcgaatcacgcagcggctcaaggtgtcgtcgatccagctatgggtaatcat
gtggcacccggtttccatggactgccaccgggtgtcggtgttccctggccggcgcacaat
cattcagcgctattccaaactggttctagcgagtcccagccggccatgacatcagtttgg
gatcttgaaaatgccaaagtcgaagaagctaagcgccaaatggagcaacagcaacatcaa
cagcaaatggctgcggaaatgcaccgtagggaattggaggaaaagcggatgaaagaggag
gaggaagaacgtcggcgtagactagaaattcaagaaagagaagaggaaaggattaggata
gaagaaatgcgacgagaaacggaacgccaacagcaagcggaagagatgagaagaagagaa
ctggcacaacagcaacaactgcaagcagcggaagagaaacgtcgccgcgaggaagaaaag
cgtaaaagagaagaagagttgaaacaacaacaaatagaagaggaaaggatccggcgagag
gaagaaagaatcagaaaagaggaagaaaaggcggctgaacaacatcgccgccaacaggag
gccttacaaaggctccaggagcagcaagctgtggctcaggcgcaagctagagctgcagca
gcggcacaacaacaagctgccgctgctgctgctgccgccgccgccgccgctcaacagcaa
gctcaggcacaagctcaagcaaaagctgctcaggctatgatggctccatgggctcaacag
caacaacaacaacagcaacagcagcaacaaaccggtgaatcgctgagcatggccgaaatt
caaaagttgcaagaggagaaggaagccaaggagagagccgttgcccaggcccaaaaggca
gaacaaacggctcgggcggccgcgcttttacagcaacaacaacagcaagcggctattaag
ctccgctgggctaagcagaacacgcccagtccgtcgaatgccaaatcgctggctgagatc
caggccgaagaagcggctcagttggcgcaacaaaaagagaaggaagccaaagaaaaggcc
aatcagcaggtgaacatggcacacctaaatctggcggcagccagcgcttgggggtcatca
caccatggcaattctgcatggacttctggccgtacggcggctgctgttgtgggtcagcac
caacccgcaccacctgcccaaccgacagctaccaccactgccgccaaaaccaatcattcc
accagcacgaacgccgactggaaagccggtctgactgttggtttctgggaggaaccaatt
tctacgccttccgctgcgtctaaagccgcaagtaaagcgacgccgtcacatcagcagcag
cagcaaacggcggccaagtctactagtggcgccaagtctgcttccgccgccacaaagcag
ccgcaacaagcaacagcagctaaacaaccggccgtttccaaaaccgtggcgtcgacgacg
acgtcgtcgaataacaagaaccgcagcaacaaggaggaagaggcggttcgcaaattgttc
aatcaaactgccgctgccgcagaaaaaaaagatagctttagtcagtggtgttttgagtac
ctgaagaaagtccaggcacagatcgatgtgcccacatttgtcgccttcctcaaggacgtg
gaatctccattcgaagtccaggagtatgttcgtctgtatcttggcgaaggaaaagatgct
aaagagtttgctaaacaattccttgaccaacgttctcgttggcgccaaatgcagcgaaat
gtccaacaatacgaggaggacaacatgtgcatcccggcaaaagccataaatccgggacaa
tcatctgacttccatgaagttaaatctaaatccaagaaatctaagaagaagatgcagaaa
gtggatgccagtttattgggattcagcgtttctgcgtctacggatcgcatcaacgtcggt
gagcgcgatttcgtggacggcatgtga
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integrated database retrieval system
