Daphnia magna (water flea): 116918233
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Entry
116918233 CDS
T07514
Name
(RefSeq) leucine-rich repeat protein 1
KO
K10348
LRR-repeat protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116918233
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116918233
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_NXF1-5
LRR_13
UPF0228
Motif
Other DBs
NCBI-GeneID:
116918233
NCBI-ProteinID:
XP_032779786
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All DBs
Position
LG3:complement(12643869..12645747)
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AA seq
405 aa
AA seq
DB search
MQVNCKVNVVNRLLPSTGKSGPSRLAWSSITLTENKSSVIELALATSRNKAGMKYRVTNN
IEQIFSKFVSQGKLTLRFREPAHDLCLSGEVKQMEKILAIIKGEDVQLKKGILCPILSNS
TNKVVIPKTKLSILSRADYPVTTSFPETLTYLKISGIALKKFDRRLLHLKLLEILDLSNN
QITVLPETMHNLSRLKQLHLSNNEIKILPETFINSARVICLDMSHNQLMTIPSCICRLSG
LQILKVDHNKLRCLPSTISKLKNLRTLTLSCNQIRILPESFQALALDHIDVFGNPFENSS
QEIPLNPGSLTIRVATLLAISAKSTIKFKLKYTEEDIPYTLITYLHESSTICPCGKLCVD
DGILSDGKINLLKVSGSVSGDKIVPVKMMLCTATCFQRFAFKMIS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaactgcaaagttaatgttgtgaatcgcttgcttccttccactggaaagtca
ggtcctagccgattagcctggtcaagcataacactcacagagaacaaatcttccgttatt
gaactagcgttggctacttcacgtaacaaagcaggaatgaaataccgtgttacgaacaat
atagagcaaattttttccaagtttgtgagccaagggaaacttacactacgctttcgagag
ccagctcatgacttgtgcctcagtggggaagtcaaacagatggaaaagattcttgctatt
ataaaaggggaagatgttcaactgaagaaagggattctttgccccattctgtctaatagt
accaacaaagtagtgataccaaaaacaaaactaagcattttatccagggcagattatcct
gtaacaactagctttccagaaacactgacatacttaaaaataagtggaattgctttgaaa
aagtttgatagacggcttctccaccttaagttgcttgaaatcttggatctctctaacaat
caaattactgttttacctgaaactatgcataacctgtccagattaaaacagttacatctt
agcaacaatgagattaaaatacttccagaaacattcatcaattcagccagagttatctgc
ttagatatgagccacaatcagctaatgacgattcctagttgcatttgtcgactatccggg
cttcaaatactaaaagtagaccataacaaactaagatgcctcccttcaaccatctccaag
ttaaagaacttaagaacactgaccttatcctgcaaccagattcgtatacttccagaatca
tttcaagcacttgcattagatcacattgacgtcttcggaaatccttttgaaaattcatcc
caagaaataccgttaaatcctgggagtctgacaataagagttgcaacgttacttgccatc
tcagccaaatctacaattaagttcaagttaaaatataccgaggaagacattccgtacaca
cttataacctacctacacgaaagttctaccatctgcccttgcggaaaactgtgtgtcgat
gatggaatattgtcggatggaaagattaatctcctaaaagtatctggaagtgtgagcggt
gataaaattgttcctgtgaaaatgatgctatgtactgcaacttgttttcaacgattcgca
tttaaaatgatatcgtaa
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