Daphnia magna (water flea): 116918278
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Entry
116918278 CDS
T07514
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dmk04990
]
116918278
Domain-containing proteins not elsewhere classified [BR:
dmk04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116918278
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NWD2_C
WD40_Prp19
WD40
DUF4062
WD40_WDHD1_1st
AAA_16
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
NACHT
Beta-prop_CAF1B_HIR1
ATPase_2
WD40_MABP1-WDR62_2nd
nSTAND1
NPHP3
APAF1_C
Motif
Other DBs
NCBI-GeneID:
116918278
NCBI-ProteinID:
XP_032779835
LinkDB
All DBs
Position
LG3:12942641..12951614
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AA seq
1897 aa
AA seq
DB search
MDDQTVDKIFAGSLGTLPPVSSKIVRIFTSSTFTDTSMERNTLMATVYPKLKEYCREKHG
LEFQVVDMRWGVRDEATDDHMTTELCMKEIENCQRLSMGPNFVVFLGQKYGYRPIPTYIL
ASELAQFREVLLTMGQEVILLDTWYKKDSNAVPPICILQPISSILVNFNNKRVPKLQQED
QAKWWDTLDRMQKLLRKAATTLYSQGQLDFDSMHNYLMSVTEREVINGLLKVRNTKNHVL
AYVRYINNINLQNLRRAGLFIDIANRALDAEAVRLLANLRDERLPAKIEPSNLMRYTVEW
IGRDGLGNDTHDEYLQNFISHFYRNIARLVDRAMRKEDSSPQGQIVTEILQHLHACNNSV
KVFYGRENDLEKVRRYILGPSIQPLTLFGAGGCGKTSLLAKSASLIVTWLSEFLENGHGG
SNPPPDTRRRGSNINGQGEGQANRKGGDTDRSESGKGDSQNDIGTTWKEEVVSCTDSGRT
SPLQGTTPGTQSRRSSRTSATLSRQESEDLASSNSSRRQSSSGVFSPVSTVTDGQSSHRG
SIALSTPIQEHIDPEPASPSVNKINKPIKPVLIMRYLGTTPDSSAITPMLISLCQQISYN
YMVPFDAIPDDLVPLTAYFKQLLALATREQPLLVFLDSVDQIGGAQDANKMAWLPTRLPP
HCKIVVSCVYEPENPEISKDCQTLRRMIDDEDNFIHVLALGEELASQVIRHWMRNSHRDL
TNYQWRVVSNAIARCSLPIFVKLVFAEICRWKSYSRAQETHLASNVMDSIMMLFERIEIQ
HGRILVFHALAYITASKSGLSETELEDLLSLDDRVLDDVYQYHMPPVRRIPPLLWTRIRN
DLPNYLSEREADGVSVLNWYHRQFKEAAKERYFKNQNLANYFHSSIAEYFMGTWGGGNPK
PFKYTEIQRMRFNLAEKEGEADRKVPLQPLVFVGKDGKVSRYNLRKFGELPYHLVRARRL
DDLFHNVLFHYQWLHAKLSSCPLQAVLSDFEDTCNNLEDREISRETVRLTTRELMLVADA
LRLGGAILTQYPDLLASQLIGRLLPEAGANLNVRRLLEQCDKEGINHCALMPTAHCLHTP
GGPLKYSLEGHQFAVFGVCLTSDARFVVSVSNKFLIWDLSTSDLTRAVNPGIEGVFQGLI
LSPDDRFAAAWTNNSQTILLNLLTSEQIVINNPLQEDETVGGACLLDTHCVLYGQSQWVL
LTMQGVAVEIHRERCKDPQFQLLAMDFESHGNYHVIFWTGDLDDKRLIMQTVNDGHRTSP
LELHSAMVMNRKRDILYACADLNSSSVSVFKLNVGDQPTGNNRKGRNCDVPAGLEPGQRE
WTKGNVLDGDDFLLQLSLSETENHVLGTTALGFCIWNAADFEKQTANAKRIDLKLPTGVR
NISVSLLQSNSIILSKNDEFAVAGVRKNLYVWKIPSGQLVKVLDAHFGRILAIVPYTVGP
WNSVITSSIDRSVKVWNLNNVFEQVHVIDRHELQIDSISLCQTTGVAVTVTRGCVGVWHI
LTGKLMDKLAYNALGAIVTHALITKDGRHILAAESGSIIIWEWPNRRAFFKVEQPSIKQI
MLMDEDTRFLTASRLGPPNEGKAVVVVRDCPNGVALYEVEVPVRTFRPAIITNDGLMLVM
LGHEKNRDYIYVFQSQTGVLMHKFIPRYQGAKKDQAGQLIPVPGKATQVALMDQDKGVVF
DVRTKKHIRTIRRWSGQVTKDGRLGLYAPSRGGLELIELRSSSTVSQLISRSAEGVFTNV
TSFNATDQYVLYYHSGHKTLRVFRVLDGQMLANYRLAAELTAIETTTDGRCVVIGTLDGC
LSVLAIADPTVPGSFQFLASLPSRTRQTRIPSAISGESSDRHDGQDANKRARKNEKEGGS
HITLKAAATVAASWAKATQTNKTGTVQSVTSKACVLS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcaaacggttgacaaaatcttcgctggttctctgggcaccctgcccccagtc
agttctaaaattgttcgtatcttcacaagttcgaccttcacagacacttcaatggaacga
aacacactgatggccacagtctatcccaaattaaaagagtactgcagagaaaaacatgga
ttggaatttcaagtcgtcgacatgcgttggggtgttcgtgatgaagctaccgacgatcac
atgaccactgagctgtgcatgaaagagattgaaaattgtcaacgcttatctatgggaccc
aattttgtggtatttctcggtcaaaaatatggctaccgtcctatacctacatacatctta
gcttcggaattggcccagtttcgcgaggttctcctaaccatgggccaggaagtcatatta
ctggacacgtggtacaaaaaagattcaaatgctgtgccgcccatttgcattcttcaaccg
atttcctccattctcgttaattttaacaacaaaagagtaccaaagttacaacaagaagat
caagccaaatggtgggatactcttgatcgaatgcaaaaattattacgtaaagctgccact
acactatacagtcaaggacaactcgatttcgattcgatgcataattatttaatgtcagtc
acggaaagagaggtcattaatggattgttgaaagtgcgcaatactaagaatcacgtcttg
gcttacgttcgctacataaacaacataaatctgcaaaatttaagaagagcaggtctattt
attgacattgctaacagagccctcgatgcagaagccgttcgattgctagccaatcttcga
gacgaaaggttaccggccaaaatcgaaccatccaatctaatgagatatactgttgaatgg
atcggccgtgatggcttgggaaatgatacccatgacgaatatttgcaaaatttcatttcc
cacttttaccgaaatattgcccgattggttgacagggctatgcggaaagaagattctagt
cctcaaggccagattgtcacggagattctccaacatcttcacgcgtgcaacaattccgtg
aaagtgttttacggacgtgagaatgatttggaaaaagttcgccgttacatcttgggtcct
tccattcagcctctgactctttttggagccggaggttgtggcaaaacatcattactggcc
aaatcggctagtctgattgtcacctggttgagcgaattccttgaaaatggacatggtgga
tctaacccacctcctgatactcgtcgacgtggaagtaacattaacggacaaggggaaggc
caggctaatagaaaaggaggagatacagatcgtagcgagagcggtaaaggtgatagtcag
aacgatattggtaccacctggaaggaagaagtggtgtcttgtacggattccggaagaacg
agtccattacaaggtacaactcctggaacacaaagccggaggagtagccgaacgagtgca
acgttatcacgacaagaatcagaagatttagccagtagcaatagcagccgccgtcaaagt
tccagtggcgtctttagtccagtgtcgaccgtaactgacggtcaaagtagtcacagaggt
tccatcgctcttagtactcctatacaagaacatatagatccagagccagcaagtccatca
gttaacaaaattaataagccaattaaacccgttttgatcatgcgctaccttggaacaaca
cctgattccagtgctatcacgcccatgttgatttccctttgtcagcaaatttcatataac
tacatggttccttttgatgccattccggatgatttggtgccattaacggcgtattttaaa
caactgttggccttggctactagggaacagcctctcctagttttcctggactctgtcgat
caaatcggtggggctcaagatgcaaataagatggcttggctacctacccgtttaccaccc
cattgtaagatcgtagtgtcttgcgtctacgagcctgaaaatcccgaaatttctaaggat
tgtcaaacactacgccggatgatcgatgacgaagacaatttcattcacgtattggccctg
ggcgaagaactagcatcgcaagttatacgacattggatgcgcaacagtcatcgtgatttg
acaaattatcaatggcgtgtcgtatcgaacgctattgcccgttgttctttgccgattttt
gttaaattggtttttgcagagatatgcagatggaaatcgtattcacgtgcgcaggaaaca
cacctggcctctaatgttatggacagcattatgatgctgtttgaacgaatcgaaattcaa
catggacggattcttgtgttccatgcgttagcctatattacagcatcaaagagtggactt
tcagaaacggaattagaagatttactttcactggatgatcgtgttcttgacgacgtatac
cagtatcacatgccacctgtgcgaaggattccacctttgctgtggacgcgcatccgtaac
gatctgcccaattatctatcagaacgagaggctgatggggtctcagtgctcaattggtac
cacagacaattcaaagaggcagcaaaggaacgttattttaaaaaccagaacttggcaaat
tattttcattcttctattgccgaatattttatgggcacctggggtggcggcaatcctaag
cccttcaaatataccgaaattcaacgaatgcgatttaatttagcggaaaaagaaggcgaa
gctgatcgtaaagtgccccttcaaccgctggtgtttgtcggtaaggacggcaaagtgtct
cgctacaatctacgcaagtttggagagctaccgtatcatttagttcgtgccagacgacta
gacgatcttttccataatgtcttgtttcattaccagtggctccatgccaaattatcgtcc
tgtccactgcaggccgtcctgtccgattttgaagatacatgcaacaatctggaggaccgt
gaaatatccagagagactgtccgcctaaccacgagggaattgatgcttgtagccgatgct
ctgcgtcttggaggagccattttaacgcaataccctgacctgctggcctcgcaactcatt
gggcgtttgctgcctgaagctggagccaatttgaatgtccgtcggcttctggaacagtgc
gataaagaaggaatcaatcattgcgccctgatgcccacagcacactgccttcacacacct
ggaggtcctttaaagtattcattggaaggacatcaatttgccgtgtttggtgtgtgcctg
acatcagatgctcgcttcgttgtttccgtctccaacaaatttctcatttgggatttatcg
acttcagatttaacgagggctgttaatccaggcatcgaaggtgtgttccagggtctgata
ctcagtccagacgatcgctttgctgctgcctggacaaacaacagtcagaccatcttactg
aacttgttaaccagcgagcagatcgtgatcaacaatccacttcaagaagatgagactgtt
ggaggcgcttgtttgctcgatactcattgcgttttgtacggtcaaagtcagtgggtattg
ctgaccatgcaaggcgtggctgtggagatccaccgtgagagatgcaaagatccgcagttc
cagttactcgcaatggattttgaatcgcatggaaattatcacgtcatcttttggacgggt
gatttggatgataagcgtttgataatgcaaactgtgaacgatggtcatcggacgagccct
cttgaacttcacagtgctatggtaatgaaccggaagcgggatatcctttacgcctgtgcc
gatctaaatagttccagcgtttccgtctttaaactgaacgtaggggaccaaccaaccgga
aataataggaaaggtcgtaactgcgatgttccagccggattggaaccgggccaacgcgaa
tggaccaagggcaacgtcctcgatggcgatgactttcttctacagttgagtctaagtgaa
actgagaatcatgtgctgggtacaacggcgttaggtttctgcatatggaacgctgctgat
tttgaaaaacagacagcgaacgcaaaaagaatagacttaaaactgcccactggagtccgc
aatatttccgtcagcctattacagtccaacagcatcatcctcagcaagaacgacgaattc
gccgtggccggtgttaggaaaaatctctacgtttggaaaattcctagcggtcaactagtc
aaagttttagatgctcattttggcagaatcctggccatagttccctacacagtgggacca
tggaattcggtcattacgtcttcaatcgaccgaagtgtcaaagtctggaatttgaacaac
gtctttgaacaggtccacgtcatcgaccgtcacgaactgcaaattgattccattagcttg
tgccaaacaactggggtggccgtgacggtgacccgtggctgcgttggtgtgtggcacatt
ttaacaggcaaactgatggacaaattagcgtacaacgccctgggggctatcgtcactcac
gcgttaatcacgaaggatggcagacatattctcgctgccgagtctggtagcatcataatt
tgggaatggcccaatcgacgcgcattcttcaaagttgaacagccctccatcaaacaaatt
atgctaatggatgaggatacgagattcttgaccgcgtctcgtttaggaccacctaacgaa
ggaaaagctgttgtagtcgtcagagattgtcccaatggcgtggctttgtacgaagtggaa
gttcctgtgcgcacattccgtccagcgattattaccaacgatggtcttatgctggtcatg
ctgggacacgaaaaaaatcgagattatatctacgtcttccagtcccaaacgggcgtttta
atgcacaaatttatcccacgctatcaaggcgcaaagaaagatcaagcgggtcagctgata
cccgtgccgggcaaagccactcaagtggctttgatggatcaagacaaaggggtcgtattc
gacgttcgtaccaagaaacatatccgcactatccgtcgatggagtggccaagttaccaaa
gacggacgtttagggctttacgctccttcgcgaggcggactggaattgattgaattgcgg
tcgagttcgactgtttcgcaattgatttctcgttcggcggaaggtgtattcaccaatgtg
acaagctttaacgccacagatcaatacgttctctattaccatagtggacataagacccta
cgcgttttcagagtcctcgatggtcaaatgctggccaattatcgattggcagctgagcta
acggctattgaaacaacaacggatggccgttgtgtcgtgatcggcacgttggatggttgt
ctgtccgtcctcgccatcgcagatccaacggtacctggatcgttccagttccttgcgtcg
ttgccttcgcgtaccagacaaacgcgtattccatcagctattagtggtgaatcgagtgat
cgtcacgacggacaagatgctaataagagagcgaggaaaaatgaaaaagaaggaggttcg
catataacccttaaagcggccgcaacggtagcggcttcctgggccaaagcaactcaaaca
aataaaacaggtactgtccagagcgtgacgtccaaggcttgcgtcctttcttaa
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