Daphnia magna (water flea): 116918347
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Entry
116918347 CDS
T07514
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A
KO
K14849
ribosomal RNA-processing protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmk01009
]
116918347
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116918347
Protein phosphatases and associated proteins [BR:
dmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116918347
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116918347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
FAD_binding-like
Abi_alpha
PPV_E1_N
Motif
Other DBs
NCBI-GeneID:
116918347
NCBI-ProteinID:
XP_045026864
UniProt:
A0A0P6GLB5
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All DBs
Position
LG3:5615579..5618638
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AA seq
689 aa
AA seq
DB search
MAVSTKTRGKSINDPKLQIENAAKKMTPEVYFARKLASNEKKIRDRSLKKLRRWIAARST
VPDAFTDDELMKLWKGLFYCMWMSDKPLIQEDLAETISGLVHSIVDRMTGLKFVTTALKT
MARDWSGIDTWRMDKFLMFVRRIIRHSLEYLAQGDWKKEEVDAYSKMLSEVIINANESTA
VLNVPIGLQLHVTNLFPEELAKAGGEGLSSSTISKMCEPFAKCLATSNDYRLKKDVHQHV
FTYLIKQSDEALVYEELGLDKQAIISMSDAKANRKKEKKFKKNKLSFVVQNEQNEKIEEE
INSPSDIDEGAADGESEDDMEMEESNFDWGAKDPRAGGIDAIIPQIKPDYNQIADMLFQM
ASEKSVRAKNRKSIYDIVKKFRDLASGIYPLAVSFPTVGPGLTPRSMKSAAKQFIKDELS
MTEQRNADRMEMRKSSKAYKKLQGIKTDILGETIEDIFEDDDDEAAVDEERSNVADLVDD
DVEDDDPVRELYSSDEDHPSDEDDEISDDVEDGKKVVVAPKQIAKMAPKSKRPQTTFEVE
KSWGEEAVPPLASMQQLKQKLKAEKRQKNSGWTVSPSKGEIEIVIPNKKFKGSQQLRTTQ
APATSENNKTNSSTNSGNRRVNFVLNKNTAQEPKDYQESLRKSPGVPHDPDRQPSGGSVL
KRNDTNTIKFTSSPVTRKPQHTGRKSSRF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctcgacgaaaacacgtggtaaaagcataaacgaccctaaactacaaattgaa
aatgctgctaaaaagatgacgccagaagtttattttgcaagaaagttagcatcaaacgaa
aaaaaaattcgtgaccggtcacttaagaaattaagaagatggatcgcagcgcgatcgaca
gtcccagatgcttttaccgatgacgaactcatgaaattatggaaagggctgttctactgt
atgtggatgtcagacaaacctttgatacaagaggatctagctgagaccatttcagggctt
gtccattctattgttgatcgcatgacagggctaaagttcgttaccactgccctcaaaaca
atggctcgtgattggtctggcattgacacctggagaatggataaatttttgatgtttgtg
agaaggattattcggcacagtttagaatatctagcacaaggagattggaagaaagaagaa
gtagatgcctattccaaaatgctatcggaagtcatcatcaatgcaaatgaaagcacagct
gtattaaatgtccccattggccttcagcttcatgtaacaaacttatttcctgaagagtta
gccaaggcgggaggagaagggttaagttcttcaactatttcaaagatgtgtgaaccattt
gccaaatgccttgccaccagtaatgactacagattgaagaaggatgtccaccaacatgtt
ttcacttacttgatcaagcaaagtgatgaagcgttggtgtatgaagaacttggtcttgat
aaacaagccatcatctccatgagtgatgctaaagctaataggaaaaaagaaaagaaattt
aaaaaaaacaaactttcatttgttgttcaaaatgagcaaaatgaaaaaattgaagaggag
ataaattcaccttctgacatagatgaaggtgcagctgatggtgaaagtgaagacgacatg
gagatggaggaatcaaattttgattggggtgctaaggatccaagagctggtggtattgat
gctattattcctcagatcaaaccagactataatcaaatagccgacatgcttttccaaatg
gcatcggagaagtccgtacgtgctaagaatcgaaaatccatttacgatattgttaagaaa
tttcgtgacttggctagcggaatatatcctttggctgttagtttcccgactgttggaccc
ggtctgacaccaagaagtatgaaatcagccgcaaagcagtttattaaggacgaactttct
atgactgaacagaggaacgcggacagaatggagatgagaaaatcgtcgaaagcatacaaa
aaacttcaaggaataaaaacggacatcttgggtgaaacaatcgaggatattttcgaagac
gatgacgatgaggcagcagtagatgaagaaagaagtaatgttgctgatctcgttgatgac
gatgtagaagatgacgatcctgtccgagaattatattcttctgatgaagatcatccttcg
gacgaagacgatgaaatctcagacgacgtagaagatggaaaaaaagtagtggtggccccc
aaacaaattgccaagatggctccaaagtcaaaacgtccccaaacgactttcgaagtcgaa
aaaagttggggggaagaagcagttcctcccctagcttccatgcaacagttaaaacagaag
ctgaaagctgaaaaaaggcaaaagaattctggttggactgtaagtccatccaaaggcgaa
atagagattgtaattcccaacaagaaattcaaaggctctcagcaattgcggactacacaa
gcaccagcgacgtctgagaacaataaaacaaattcatctacgaacagtggaaaccggcga
gtcaattttgtactcaacaaaaacactgctcaagaacctaaagactatcaagagtcccta
cggaagagtcctggagttccgcatgatccggatcgtcaacccagcggtggtagtgtgtta
aagcgaaatgacactaacaccataaaatttacgtcatccccagtaactcgcaagccccaa
cacactgggcgaaagtcttctagattctga
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