Daphnia magna (water flea): 116918397
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Entry
116918397 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116918397
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116918397
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
116918397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
116918397
NCBI-ProteinID:
XP_032779992
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All DBs
Position
LG3:complement(4826163..4832497)
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AA seq
490 aa
AA seq
DB search
MNIELEELPIFPRNANENARGERKESRTENGMACLLPVLSARRCDRRESCVEKGVSHILE
KVPPAPSANRVERKESRLENGTPNITGSVSPLHSRVFGMRERASRQLQNTASVNGSKPIT
EPIAVALRRIVFGQCPAPIKAEYFSRGPGLVFREAERDLGYALMVSHAAGLPIANSLMMA
LQTHILRILLFDVRPSRVYQPDPLKPSFSMQQEALCTAITDIIWTAGGCHYGVLCLPHPI
HIHVEESDHFNADGVTEKLNILECQDREELQYFVRRNLFLFQQDPGPALLLLIYSAVLAR
GIDRIAEDMGTRWITGTNSYLSSLINYSGDISFSALNLILSGRAASYLHNGTHFQEDKDK
IMIAQHGIQARSPIGLLLWMRTEEKTAAYKLGSRLKTPVYPIWLIIASEQSGVLFSDDRD
LLRDYRSEIRFELHYHTSSHNQLTPAVLVIRTKLPLEVPEEDVALPTLDKIIRTKWSGAR
VSWNGLTPFL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgagttggaagagctgccaatctttccaagaaatgcaaacgaaaacgcgaga
ggcgaaaggaaagaatcacgaacagaaaatggaatggcctgccttcttccagttcttagc
gcgagaagatgcgacaggagagaatcttgtgtagaaaaaggcgtgagtcacattttggag
aaggtcccaccagcacccagtgcgaatcgagtggaaaggaaagaatcccggctcgaaaat
ggaacacctaatatcacgggcagcgtttcaccactacatagtcgagtgttcgggatgcgt
gaaagagcatcacgccaacttcaaaacacggcatcggtcaacgggagcaagcccataacg
gaacccattgcagtggcgttgcgacgaattgttttcggccagtgtccagcaccaatcaag
gctgaatatttttcacgaggcccaggacttgtttttcgtgaagcagaacgtgatcttggt
tacgctttgatggtgagtcacgcagctggattgccgattgccaactcattaatgatggct
ttacagacacatatcttgcgtattctactgtttgatgttaggccatccagggtataccaa
ccggatccattgaagccttcattttcaatgcaacaagaagcgttgtgtacagccatcacc
gacatcatctggacagcaggtggatgccattacggggttttgtgtttgccacatccaatt
catattcacgtcgaggagtctgaccacttcaatgcagatggtgtaacggaaaaacttaac
atacttgaatgtcaagatcgggaggaactccagtactttgtgagacgcaatctctttctg
tttcagcaagaccctggtcctgccttgctgcttctaatttacagtgccgtcttagcccgt
ggaattgaccgaattgcagaggatatggggacacgatggataacgggtacaaattcctat
ctctcaagcctgatcaattattctggagacatcagcttcagcgcgcttaatttgattctg
tcgggcagagcggcatcatacctgcataatggaactcattttcaggaagacaaggacaag
atcatgattgcccagcatggaattcaagcgcgttcacctatcggattactgctgtggatg
cggactgaagaaaaaacagcggcatacaaattaggctcacgattaaaaacaccagtctac
cccatttggctgattatcgcctcggaacaaagtggagtcctatttagcgatgatcgtgat
ctcctccgagattaccgctcagaaattagattcgagttgcactatcacaccagttcgcat
aaccaattgacaccagccgtgttggtaatacgaacaaagctgccactggaggtacccgaa
gaagacgtggctcttccgacgttagataaaatcatcagaacgaagtggagcggagcacgc
gtgagctggaacggcctgaccccatttttgtaa
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