Daphnia magna (water flea): 116918409
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Entry
116918409 CDS
T07514
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116918409
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116918409
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
90S particles
Helicases
116918409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
AAA_22
HA2_N
ResIII
nSTAND3
Flavi_DEAD
ATPase
AAA_30
AAA_16
TsaE
T3SS_needle_F
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116918409
NCBI-ProteinID:
XP_032780002
LinkDB
All DBs
Position
LG1:complement(1548677..1553191)
Genome browser
AA seq
1209 aa
AA seq
DB search
MGPNKKGFNWKARQVVTTKIIQTEGVEIEISGTQSSKYDECNALVLPSKKRKTKVVKEKK
SSQRILSKTQRKKLEKIVDVKKKKANRADLLESLAKLQPSAQEFSMMTSLTSVQTKGIKR
SMAEVDSVQLFDETGVKNQSSGTAGSKRRQRWKEKEDQEKVENPRTDGNVIGIEVIEESS
SSENEEMEEEEDENTEEPDENIEESEENKEEPEGSKETPRKEDKEDKEDVSEETISKAGK
ADISNGNIIATEECTLVEKDGKTPAPKREAKPAIFVPVHRTAEVQAARMKLPILAEEQAI
VEAINENPVVILAGETGSGKTTQVPQFLYEAGYAANGKIIGVTEPRRVAATSMANRVADE
MNLHDGQVGYQIRFEGNVKDNTRIKFMTDGVLLKEVQKDFLLSNYSVVIIDEAHERSVYS
DILLGLLSRIVMLRHKRGNPLKMVIMSATLRVEDFTENRRLFKNKPVVIQVEARQFPVSV
HFNKRTAFEDYVDEAYRKVCKIHRQLPDGGILVFLTGQQEVNALCRKLRQTFPGVKKVEK
PDPADASSAQPEDVPIASDPEEDEDMEKVLAKIKRKQQIMKKRSKKEVDQRIKINLDHYS
ALPLQEQEQDHDENLGDLADSDQELDINDEQSEALSQSQTAPPLWVLPLYSLLPSNRQQK
VFAPPPEGSRLCVVSTNVAETSLTIPNVRYVVDTGRVKTKFFDKITGVSAFHVTWTSQAA
ANQRAGRAGRTGPGHCYRLYSSAVFNDEFEKFSLPDIARRPIDDLVLQMKSMDIEKVIHF
PFPTPPDIQQLYAAERRLLLLNALEPPPRSIGLKKSQEWTSKITPLGRAMAAYPLAPRYA
KMLLLSQQNDLLQLSITLVAALSVQELVLDQPADSEAGDTHRRWLGQRRSWAGTGQSLLL
GDPMVLLRAVGAAEYSGDIEAFCSTNGIRSKALREVRKLRVQLTNETNLILPSGTASIVV
DPRMAPPTELQAKLLRQILMAGLPDHVAKRIPPNEIKEAEDRRKYKYAYRCPEMEDPVFL
NPSSILRYSHPEWIVYQDIYEHADKIYLRGITAIEPEWLPIFSPTQCTFSAPLELPTPRY
DSDQGRVMCHMNVTFGRSGWPLPVMELEYPAGIDRFKFFAQFFLNGDVCRPLAKYTASLL
STPSTMVKTWAKLQPRTQMLLQQLTISNVDSLDLLLAAWQKDKFYLLEVYKAWVPESLHE
EISTLWPPV
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgaataaaaagggattcaattggaaagcacgacaggttgtaactacaaaaatt
attcagacagaaggggttgagattgagataagtgggacacaatcttctaaatatgatgaa
tgcaatgctcttgttctgccatcaaaaaaaaggaaaacaaaagtagttaaagaaaagaaa
tccagccaacgtattttgtcaaagacgcagcggaagaagctcgagaagattgtagatgtg
aaaaaaaagaaagctaatagggcagatttattggagtctctagcaaagttgcaacccagt
gctcaggagttttccatgatgacatctttgacttcagttcaaactaaaggaattaagcga
tctatggcagaagttgactctgttcaattgtttgatgaaactggagtaaaaaatcaatca
tctggaactgctgggagcaaaaggagacagcgctggaaagaaaaggaagaccaagaaaaa
gttgaaaaccccagaactgatggaaatgtgatcggcatagaagtaattgaggaatcaagc
agttcagaaaatgaagaaatggaagaagaagaagacgaaaacacagaagaaccagatgaa
aacatagaagaatcagaagaaaacaaagaagaaccagaaggaagcaaagaaacaccaaga
aaagaagataaagaagataaagaagatgtttccgaagaaactatttcaaaagcaggcaaa
gcagatatctctaatgggaatataatcgcaacggaagaatgtaccctcgtcgagaaagac
ggtaaaacaccagcgcctaagcgcgaagcaaaaccggcaatttttgttccagtccaccgc
actgcagaggttcaagcggctaggatgaaattacctatccttgccgaagaacaagcaata
gttgaagccatcaatgaaaatccagttgtcattttggccggagaaaccggaagtggaaaa
actactcaggttccccaatttctctatgaagccggttacgcagccaatgggaaaattatt
ggtgttacagaacccagaagagtcgccgctacctcaatggcaaatcgcgtggctgacgaa
atgaacttgcatgacggccaagttggttatcagattcgtttcgaaggaaacgtcaaagat
aatacccgaattaaattcatgactgatggtgttttattgaaagaagttcaaaaagatttc
ctcctaagtaattactctgtcgtgatcatcgatgaagctcacgaacgtagtgtttactca
gacatcttactcggtttgttgtcgcgcattgtcatgcttcgccacaaaagaggtaatcca
ttgaaaatggttattatgtcggccacccttcgcgtggaagattttacggagaaccggcga
cttttcaagaacaagccagttgttatccaagttgaagcaaggcaatttcccgtttcagta
cattttaataagcggacagccttcgaagattatgtagacgaagcatatcgcaaggtgtgc
aaaattcatcggcagttgccggatggtggcattctggtctttcttactggccagcaagag
gtaaacgcactctgtagaaaattgcgtcagacgtttccgggtgtcaaaaaggtggagaaa
ccagatcctgcagatgcttcatctgcacaacccgaagatgttccgattgcgtccgaccct
gaagaggacgaagatatggaaaaagttttggccaaaattaaaagaaagcaacaaatcatg
aaaaagcgctcaaaaaaagaagtagatcagcgaataaaaatcaatctggatcattactct
gcgttgccactgcaagagcaagaacaagatcacgatgaaaatcttggagatttggctgat
tcggatcaagagctagatatcaatgatgagcagtcagaggctttatctcagagtcaaact
gcccctcctttgtgggttctgcctttgtactctcttctaccatctaatcggcagcaaaaa
gtgtttgctccgccacctgaaggatcaagattgtgtgtagtgtccactaacgtcgccgaa
acttctcttacgattcctaatgttcgttatgttgtcgatactggtcgagtcaagactaaa
ttctttgacaaaatcacgggggtatccgcatttcacgtcacctggacctcgcaggcagcc
gccaatcaacgtgctggtcgagctggtcgcacaggccctgggcattgttatcgactatat
tcttctgccgtttttaatgatgaatttgaaaaattctctttgccagatatcgcgcgaaga
ccgattgacgatttagttctgcaaatgaagtcgatggacattgaaaaagtgatccacttt
ccgtttccgacgccacccgatattcagcaattatatgcggctgagcgccggctattattg
ctaaatgcactggaaccgccgccacgcagcataggactaaaaaaaagccaagaatggacg
tcaaaaatcactccactcggcagagccatggcagcttatccattagcaccacgctatgca
aagatgttattattaagccaacaaaatgatctgcttcaactgagcatcaccttggtggct
gcgttatctgtacaagaacttgtgctggatcagccagccgattctgaagcaggtgacacg
cacagaaggtggcttggccaacgtcgatcatgggctggaacaggacagtccctacttttg
ggagatcccatggtactcctgcgggccgttggcgccgccgagtactcgggtgatatcgaa
gctttttgttcgacgaacgggatacgtagcaaagctcttcgcgaagtacgaaaactgcgg
gttcagctgacaaacgagacaaacttgattttaccgtcaggaactgcatcgattgtggtc
gatcctcgtatggcgccacccactgaattgcaagccaaacttttgcgtcagattctgatg
gccggacttcccgatcatgtggccaagcgaatacctccaaatgaaatcaaggaagccgaa
gaccgtaggaagtacaaatacgcttatcgctgcccagaaatggaagatcctgtcttctta
aacccatcgagtatcttgcgctattcgcaccccgaatggatcgtttatcaggacatttat
gaacatgccgataaaatctatttgcgtggtattacggccatcgaacccgaatggctcccc
atatttagtcctacacagtgcaccttctctgctcccttggagcttcctacccctcgttat
gattcagatcagggtcgtgtaatgtgtcacatgaatgttacatttgggagaagtggttgg
cctcttcctgtaatggagctcgaatatccagctggtatcgaccggttcaagtttttcgcc
cagtttttccttaatggagatgtttgtcgtcctttggcaaaatacactgcatctctgctg
tcaactccatcgacaatggtcaagacatgggcgaaactccagcccaggacacaaatgcta
cttcaacaactgacaattagtaacgtcgatagcttagatttgcttcttgccgcttggcaa
aaagataaattctacctcctggaggtctataaagcctgggtgcctgaatcacttcatgaa
gaaatttccaccctttggcctcctgtgtaa
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