Daphnia magna (water flea): 116918442
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Entry
116918442 CDS
T07514
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116918442
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116918442
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
116918442
NCBI-ProteinID:
XP_032780051
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All DBs
Position
LG3:13509518..13512756
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AA seq
674 aa
AA seq
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MSSRACQNCGGTDIDVDQSRGIAVCTNCGVVLEENCIVSEVQFEENAYGGASAIGQFVSN
DNQGGTGFINSYRGGNGKQSREITMKRAREKITTMGQQLNLNQHCIDMAVNFYGMALARR
LTNGRKSSHVVAACIYITCRMEGTAHLLIDIADVIDIDVYTLGHNFMQIAKAFNLNIPSV
DPCLYVMRYANRMNFGDKTHEVSRTALRLVQRMKRDWIHTGRRPSGLCGAALLIAARIHG
FNRTVLDVIKEVKVHENTVRKRMQEFGETASSSLTLEEFMQVDLEEEHDPPAFLKSRKKD
RSDKVEEEATEEMVKLEEEINRQIALSLAKKRGPWAKYSKEALQQPVSPASCTSGISSPS
ADPEVDDVIADMTMTAVKECLTPTEVAAVEANTLPTAGTTDPGADESALMPPPGATYLQL
RHHLRPSLASLGIFSGSGEKEEISKEEAVASDSGELDLEGIDDSEMDTYIKTEDEAKMTS
DMWMALNGEFMKELEAKQKRRAEEEEEKQKRGEKRKRKAARRQPQSYSGATPGEAIGKML
VGKRISNKINYEKLKDLDFSFAPTSSVSNSVPSTSAVISEPAVESVVPSSTSTRSGGAKV
NLSAVKPRGPTALKSETKPLKGKLQPPSPTPPPPQQEDVYEEEEEEEEDEIQSVGNLLNS
FHGDGGYGGDYDEY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagagcttgccaaaactgtggtgggacagacattgatgtcgatcaatcgaga
ggcatcgcagtttgtacaaactgtggtgtggtccttgaagaaaattgcattgtttctgaa
gtgcaatttgaagaaaatgcttatggaggtgcatcagccattggacagtttgtatcaaat
gataatcaaggaggcacaggatttatcaacagctaccgtggaggaaatgggaaacaatca
agggaaataactatgaagagggccagggagaaaataacaactatgggacaacaattaaac
ctcaaccaacactgtatagatatggctgtaaacttttacggtatggctctggctcgccgt
ttgacaaatggcaggaagtcttctcatgttgtggctgcatgcatatatataacttgccga
atggaagggactgcccatcttctgatagatattgcagatgttatagatattgacgtttac
acacttggccataatttcatgcaaattgcgaaagcatttaacttaaatattccatcagtt
gatccttgcctgtacgtcatgcgttatgctaatcgaatgaatttcggtgataaaacacac
gaggtgtccaggactgccttacgtcttgtacagcggatgaaacgtgattggattcacact
ggtcgacggccttctggtctttgcggagcggcattactgattgctgctcgaattcacggc
tttaatcgaacagtgctcgatgttatcaaagaagtcaaggtccacgagaacaccgtacga
aaacgcatgcaagagtttggcgaaaccgcttcaagtagtctgaccttagaagagttcatg
caagtagatctggaagaagagcatgatcctccagcctttcttaaatcgcgtaagaaagac
agaagtgacaaagtcgaagaagaggcgacggaagaaatggttaagctagaggaagagatt
aatcggcagattgctttgagtctggcaaagaaacgaggaccttgggcgaaatattcaaaa
gaggcgcttcaacagccagtctctcctgcttcgtgtaccagtggaataagtagtccatcc
gcggaccctgaggtggatgacgttattgcagacatgacaatgacagccgtcaaggaatgt
ctgactcccactgaagtggccgccgtagaggcgaacaccttacccactgccggtacaact
gatcccggggcagacgagtctgctttaatgcctcctcctggtgccacatatctgcaactg
cgacatcatctcaggccttcactagccagccttggtattttttctggatccggggagaag
gaagagatcagcaaagaggaggccgttgcctccgattcgggagaacttgatttggaggga
attgatgactcggagatggatacatatattaaaacagaggacgaggcgaagatgactagt
gacatgtggatggccctgaatggagaatttatgaaagagttagaagcaaaacagaaaaga
agagcggaagaagaggaagaaaaacagaaaaggggcgaaaagcgcaaacgtaaggccgct
cggcggcaaccgcaatcttattcaggtgccaccccaggcgaagcgatcggtaaaatgttg
gttggcaagcggatttccaacaagatcaattacgaaaagttgaaggacttggatttttct
tttgccccaacatcgtccgtttccaattcagttccgtcgacatcggcagttatttctgaa
ccggcagtagaatccgttgtgccatcttcaacgtcaactagatctggcggagccaaagta
aatttgtcggctgtgaagcccagaggacccactgccttgaaatccgaaacgaagcccctg
aaagggaaactacaaccgccttctccaacgccacctcctccccaacaggaagatgtatac
gaggaagaggaagaagaagaagaggatgaaatacagtctgttggaaacctactcaatagc
tttcatggagatggaggctacggtggcgactacgacgaatactag
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