Daphnia magna (water flea): 116918770
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Entry
116918770 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116918770
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116918770
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116918770
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116918770
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116918770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
CaM_bdg_C0
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116918770
NCBI-ProteinID:
XP_032780422
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MSKMDQASKEAWQWVDSTEAQAITIDHMHTSYRLKVPKCKPGKCKKNCRVNPRCLAGLGE
KAWLEELKVTDEEPEDPCDVVRTEGNFVGLTNLGATCYINSLLQLWFHNPIFRKAIYSWV
PFFDPSEKGNRTLDLLEKGGFIPSSPVGKLQLLFALMQFSKRSCVNPTLLIASLGIDTTT
QQDAQEFSKLFLNLLEEKLSLQTDPEVSTMVPNQFRGEYEYVTRCSKCQKESSSPSAFYE
LDLSLGSKSDVTLDECLAEFLHEEKLEGTDQYFCENCSSKQNATRSIRLRHLPSMLNIQL
LRFVFDRKTGLKKKVSSTVHFPFSIDMSNYVKTQGGVQSNQNYDLSAVLIHRGPSAYSGH
YIAHIKDPISGTWYKFNDEVVQKIEGTNFKLGIEEDLEDSKKSRTGPKVGKGSHGSSNAY
MLVYSRRDAAKPESHVASSNELSDPSAVLPPWVQTTLFNENENFEKWNRDKISRKDESLK
KSREKHSKMKRQYGNLPCDSLDKGEFIPTQWLMSWLGNDEKLGSIDNSILLCEHGKLNPE
KFREYKLVSSSVADELYKEYSGGKRLDETSLCWECVTTKCLTSQLRSQLDHESKLITNLM
KNKIEPGQPSFWIGKESLRSWKKMVLDRRIISERESVKVRTVLRKATTTNQCENHCEAPS
KSKYKFERKRSNGQCNGAGSLELEKYFDRQPDRSEWQAEFEKTLEWENRPSSSSSIGEIG
FNEDLLCPHDKLTADEGPRRLIHAAVWEILHRHFPEAVEFSSSESPCEKCIRMVEQEGQT
KESNKQLAMQQKAVLQDLFRCKNRPDPFAEGNSEIYVIAKEVIDKWRAFVRDPSRKEPVT
CLSNAQLLCHHEGLLHRPSPDIESESRFVYLWPYEWEALSRFAKVDRIVLLRRIVHEDGT
GVSLNTEPAVCESCLEDRLEEERRSQLVYSRAAIYVRQVDKIGALTDILLDAPSILASSS
STAEDPDFQMGSETKRPRLDSQALAVSCPSPSLSPAATGQHQASRRSSRQRRGRGEKEIT
VSSDQTLLDLKRDIMKKFQVAPFDQHLTCNGRDLNDNQATLASLRIFPGTVIILQADEPS
EDPSLMEDYARTAIPEEGFKGTELLRS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatggaccaggcttccaaagaagcatggcagtgggttgatagcacagaagct
caagccataacaattgatcatatgcacacttcttacagactcaaagtccctaaatgcaaa
cctggaaaatgcaagaaaaattgcagagttaacccccgatgccttgctgggttaggagag
aaggcatggttagaagagttaaaagtaactgatgaagaaccagaggatccatgtgatgtt
gttcggacggaaggaaattttgtggggctgaccaaccttggggctacctgctacatcaat
agcctgctgcagctttggttccacaatcctatatttcgcaaagccatctactcctgggtt
cccttctttgatccttcagaaaaaggcaacagaactcttgatttactagaaaagggtggg
tttattccaagttcacctgttggtaaattacaactactgtttgctcttatgcagttttct
aaaagaagctgtgttaatccaaccttgttgattgcatcacttggaatagataccaccacc
cagcaagatgcacaagaattttcaaaattatttcttaacttgctggaggaaaaactgtcg
ctccagacagatccagaagtttcaacgatggttcctaatcaattcagaggggaatatgaa
tacgtaaccaggtgctccaaatgccagaaagagtcgtcaagtccctcggctttctacgag
ttggaccttagccttggtagtaaaagcgacgtaacattggatgaatgtctggccgagttt
ctgcatgaagagaaactggaaggcacagatcagtacttttgcgaaaattgcagtagcaaa
cagaatgcgacgcggagcatccgcctccgccatttgccctcgatgcttaacattcaactc
cttcgattcgtctttgatcggaaaactggactgaagaaaaaggtcagttcaacagtgcat
tttccgttttctatagacatgtcgaactatgtcaaaacacaggggggggtgcaaagcaac
cagaattatgacctttcggccgtcttaattcacagaggacccagtgcctacagtgggcat
tatattgcacatattaaggatcccatttcaggaacttggtacaaatttaatgatgaagtt
gtacagaaaatagagggtaccaatttcaaattgggcatcgaagaagacttggaagattct
aaaaagagtcgaactggccccaaagttggcaaaggcagtcatggttcgagcaacgcttac
atgcttgtttacagccgacgtgatgctgcgaaaccagaaagccacgttgctagctcaaac
gaattatctgatccttcggccgttctgcctccctgggttcaaactactttgttcaatgaa
aacgaaaactttgaaaagtggaatcgcgacaagatttctcgtaaagatgaaagtttgaag
aagagcagagagaagcattccaaaatgaagcgacagtacggtaatcttccttgcgactcg
cttgataaaggcgaatttataccaacccagtggttaatgagttggctaggcaatgacgag
aagctaggatctattgacaattccattttactatgtgagcatggcaagctaaaccctgag
aaatttcgagagtacaagctcgtttcttccagcgtggctgatgagttgtacaaagagtat
tccggaggcaaacgtctggatgaaacctctctctgttgggaatgcgttacgaccaaatgc
cttacgagccaacttcggtcgcagcttgaccacgaaagcaaactgataacaaatctgatg
aaaaacaaaatcgaaccgggccaacccagtttctggattggtaaagagtctttacgctcc
tggaagaaaatggttttggacagacgaataatttccgaacgagagtcggtgaaggtgaga
actgtgctccgaaaagctactactaccaatcaatgtgaaaatcactgtgaagcacctagc
aagtcgaaatataagtttgagagaaaaagaagcaacggtcagtgcaatggggccggttca
cttgaattggaaaagtatttcgacaggcagcctgatcgaagtgaatggcaagcggaattt
gagaaaacattagaatgggaaaaccgaccatcgtcatcgtcttcgataggagaaatagga
ttcaatgaagatctcctgtgtcctcacgataaattgactgctgatgaagggccacgcaga
ctaatccatgcagctgtttgggaaatactacatcgtcattttcccgaagctgtagaattc
tcctcatcggaatccccgtgcgaaaaatgcattagaatggtggaacaggaaggtcaaacc
aaggaatcaaataaacagctggcgatgcaacagaaagccgtgcttcaggatctgtttcgt
tgtaaaaacaggccggacccatttgccgaaggaaacagcgagatttacgtcatcgccaag
gaagtgatcgacaagtggagagcctttgtcagggatccttctagaaaagagccagtcaca
tgtttatccaacgcccagctgctgtgccatcacgaaggactgcttcatcggccatcgcca
gacatcgaatccgagtccaggttcgtttatttatggccctacgaatgggaggcgctgtct
agatttgccaaagtagacaggatcgttcttttgcgccgtatcgtccatgaagatggcact
ggcgtttctcttaacacggaaccagccgtgtgcgagagctgcctagaggaccggttggag
gaggaacgtcggtcgcagctagtctacagccgggcagctatctacgtccgccaagttgac
aaaattggtgcattaaccgacatccttttggacgcaccctccattttagcatcttcatct
tccactgccgaagatcctgacttccagatgggatcagagacgaagaggcctcgactagac
agccaagcgttggccgtgtcgtgcccatcaccttcgctgtctccggctgctacgggccag
caccaggccagcaggaggagttcgcgtcaaagacgtgggcgaggagaaaaagagatcacc
gtctcatccgatcaaactttactcgatctcaagcgtgatattatgaaaaagtttcaagtg
gcgccgttcgaccaacatttgacatgcaacggacgtgacttgaacgacaaccaagccacg
ctggcttccctgcgtatcttccctggcaccgtcatcatccttcaggcggatgaaccgtcg
gaagatccatcccttatggaagactatgcacgaacggctatccccgaggaaggatttaaa
gggacagagctcctccgcagctga
DBGET
integrated database retrieval system