Daphnia magna (water flea): 116918829
Help
Entry
116918829 CDS
T07514
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116918829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116918829
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
116918829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S1
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
116918829
NCBI-ProteinID:
XP_032780495
LinkDB
All DBs
Position
LG3:4448869..4455529
Genome browser
AA seq
1356 aa
AA seq
DB search
MAVDVVRKLSKLVMSNNNQQQKEIVQQTIDTLSREDILRAVPDIVHSNGAPNLIRLVLEG
LSNSSHHRDNLMLNVMKSILTELCDSEAVPENCAVDIVHLMSLNSHDLSSNNLAELVQLC
LSFIQKGKNLRGKWLSLFPMIFSELGKQNRVTLDSDSMTGAEYCDGVISSLCDTEIAVDD
AVAFTAVLRELRIPGTIVHKFVLKLCAIIPDMEPQEVPPFVYQLLFLCYQSDHLIPLEHL
AKYFEMKLSRYGQSTNLSSRGESMEIDCDIETGSPKEILQAKATSIFHISRAAATGHPLG
KEFVKFLRSRIDVPELVLVPFILEVALSLGALPQLRDIIGLLRKLVQRLLRSNERLRHSA
WMRELMLGKQIDVQKMFNTIMLQGTSEGDNIVKGFELLAFDLLEIRNAGGFGRPSIAGPN
LGNASSSSGTTSGTVPEQCWHIGAHILLQMIRKFPDSAPLIVKKLAERLQDVSNDSQYIT
TISLMVQHNPLSMLECKVSFTMLLYSMEYRGLVSAKRLYTGISPLFRSSGALRDSAFLVL
RKLLHSCLEEVRQVAVVGFLEILKNFRFYVPTIGSSLSQTSISSQATVDVHHTQTSNSNR
AFCSELLKLLQCALSQQASVRLTLYQNLPEVVSRNPELLPECIKMLRCHLKFFIDPEAVV
QVDMCITKDGHNSHVIEPLGHLIQAIHQSILRSGKTNYFAKEDIDPKSEDQVDLGVLLIR
KVVTKMAESSVDDYVVGDVQELSAQLKIQTLSSVCIALADFCLAENATTNVIAAKRLVSL
YEMQTRFDSLLSEVGKGKGKGKAPKRTKKGKENSIDESPITDDTPKAPTKIFEKCTPSLQ
SISAFIGFLKDSNQTIANEKEILAFFKPQIGLRLWFAQSAFSKYQAFCNSKDIEGLSPES
VTKFSGTIARALLLHCQNTRQVADDRSSAMYCTALNCLHEIILGFCKHNPTKLGRLLTAM
DQVERPAAGIPLENQIAKTLKHFKDLLNHLLSGRENEDLVTKAVLPIVGTLIVLSDQLDP
AGAEYTELFDWTHNLCKNVECRESSIAKPLINLLAHLSMASESSPSILEELAKEVRLAIG
ALDEENSSTTESNKLATVNEDTAVVVLTVLTARLEQLIQVVEWALPRIGILERGDASPLV
EQSINTRLKLIAVALNQLVLADISPGPNSELILKLAISFYTTMGRVAKKQKSVLPSFRTL
VRTTARLTKNLSTFIAHLDDKQIHEKGFKRKKGDKEVAPRMDRCARSIPQLTYAIEQYNQ
AILGVSKRTKEDLSFGSKLGTTRDFRIKADKVNEALEGNAHSTESESESEDEEMEATNSV
NRTAQTDSRVRGTARRSRGRGRGKFTSVGKANTSQK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatgtagtgagaaaattgtcaaaattggttatgtctaacaataaccagcag
caaaaggagatagtgcaacaaaccatagacacactgagcagagaagatattttgagagca
gtacctgatattgtgcattctaatggggcacccaatttgattcgcttggttttggaagga
ttgtccaatagtagccatcacagagacaacttgatgcttaatgttatgaaatcaatttta
actgagttatgtgacagtgaagctgttccagaaaactgtgcagttgacattgtccatctg
atgagtttgaatagtcatgacttaagcagtaacaacttagcagagctagtacagctttgc
ttgtcgtttattcagaaagggaaaaacttaaggggaaagtggctttcactttttccaatg
atattttcagagttgggaaaacaaaacagagttactttagactcagactcaatgacaggt
gctgagtattgtgatggagtaataagttcactctgcgatacagaaattgcagtagatgat
gcagtagcattcactgcagttttgagagaactgagaatccctggcaccatagttcacaag
tttgttttaaaattgtgtgccataattccagacatggaaccacaagaagtacctccgttt
gtttaccaactgctcttcctgtgctatcaatcagatcatttgatcccactggagcatttg
gcaaaatattttgaaatgaagctaagccgatatggccagagtacgaatttgagctcccga
ggagagtcgatggaaattgactgtgatattgagactggatcccctaaggaaattttacaa
gcaaaagcaacttcgatttttcacatttcccgagcagcggccacgggtcacccactcggc
aaagaattcgtgaaattccttcgtagtagaattgatgttcccgaacttgtcctggttcca
ttcattctcgaggtcgcattatcacttggagccttaccgcaacttcgagatattataggc
ttgttgcggaaattggtgcaacgtcttcttcgatccaacgagcggctgcgacattctgct
tggatgcgggaattgatgttggggaaacaaatcgatgtccagaagatgtttaacaccatc
atgttgcaaggcacaagtgaaggagataacattgttaaaggatttgaactactcgccttt
gatttgttggaaatccgaaatgcgggtggctttggtcgtcctagtatagctggaccgaac
cttggtaatgcatcaagttcgtcaggcaccacttctggaactgtaccggagcagtgttgg
catatcggcgctcatattcttttacaaatgatcagaaaattcccggattcagccccactc
attgtaaaaaaacttgctgaaagattacaggacgttagtaatgattcgcaatatatcaca
acgatttccttgatggtccagcataatccacttagcatgctggaatgcaaagtttctttt
accatgttgttatacagcatggaatatcgtggattagtttctgccaaacgtctttatacg
ggtatctcgcccctgtttcgttcatcaggtgccttacgtgacagcgcctttctggtgtta
cgcaagctactgcacagttgtttagaggaagttagacaggttgcagtagtgggttttcta
gaaattctgaaaaattttcgtttctacgtccctacaatcggttcatccctcagccaaact
tccattagtagtcaggcaacagtagatgtgcatcacacccaaacatcaaattccaacaga
gcgttttgtagtgaactgttaaaacttcttcagtgcgctttgagtcaacaagcatcggtt
cgtttgacactatatcagaatttgcccgaggttgtttcccgcaatccggaacttcttccg
gagtgcattaagatgttgcgttgtcatttaaaattttttattgatcccgaagctgtagtc
caagttgacatgtgcataacgaaggatgggcacaattcccacgtgatagaaccattagga
caccttattcaagccatacaccagagcattttgcgaagtggcaaaacaaattactttgcg
aaagaagatatcgatcccaaaagcgaagatcaagtagatctaggagttctgctaataaga
aaagtagtcacaaaaatggccgaatcatcagttgatgattacgtcgtaggggacgtacag
gagcttagcgcccagttgaagatccagacactttcatctgtttgtatcgccctcgccgac
ttctgtctcgccgaaaatgccaccacaaatgtaatagcggccaaacgcttagtcagtctg
tacgagatgcaaacccgttttgattcacttctcagtgaggtcggaaaaggcaagggaaaa
ggcaaggctcctaaaagaacgaagaaagggaaagaaaactccatcgatgaatcgccaata
acagatgacactccaaaagcaccaacgaagatatttgaaaagtgtactcctagtctccaa
agtatttctgcgttcataggatttctgaaggacagcaatcaaactattgctaacgaaaaa
gagatactggcgttttttaaaccacaaattgggctacgactttggttcgctcaatcagcg
ttcagtaaatatcaggcgttttgcaacagcaaagacatcgagggacttagcccagaaagt
gtgacgaaattcagtggcactatcgcacgtgctctattgctccattgccagaacacgcga
caggtagcggacgatcgttcttcagccatgtactgcacagctttaaactgccttcacgaa
attattcttggtttctgtaaacataatcctaccaagctaggtcgcttgttaacggcgatg
gatcaagtggaaagaccagcagctggaattcctttggaaaatcaaatcgcaaaaaccttg
aagcactttaaagatttgttaaatcatttgttatcaggaagagaaaatgaagatctcgtc
acgaaagcagtcttacccatcgtcggaacgttaatcgtgctatcagatcagttagaccca
gccggtgctgaatatacagagctgtttgattggacgcataatctgtgtaaaaacgttgaa
tgcagagaatcttctattgcaaaaccccttattaatcttcttgctcacttaagcatggca
tcagaatcaagtccgagcattttggaggagttagctaaagaagttcgtcttgccattggt
gctttagacgaggaaaactcatccactacggaatcaaacaagttggcaactgtcaatgaa
gatacggccgttgttgtccttactgtgttaacagcacgattagaacaacttatccaggtt
gttgaatgggctttacctagaattggtattctcgaacgtggtgatgcatcgcctttggtt
gaacaatccattaacacacgtcttaaactaatcgctgttgcgcttaaccagctcgttctt
gcggacataagtccaggtcccaattcggagctcattctcaagttagccatctcgttttat
acgacgatgggacgcgtcgcgaaaaagcaaaaatctgttcttcctagtttccgaactttg
gttaggacgactgcacgactgacgaagaacctcagcacctttattgctcatcttgacgac
aaacagatacacgagaaaggattcaaacgcaaaaaaggagacaaagaagttgctccaaga
atggacagatgcgcgcgatctataccacaactgacctacgccatagagcaatacaatcaa
gccattttgggcgtcagcaaacgcacaaaggaggatctatcatttgggtccaagctgggc
acgacaagggacttcagaatcaaagctgataaagtcaatgaagccttggaaggaaacgct
catagcacagaatcagaatcagaatcagaggatgaggagatggaagcaaccaatagtgtg
aatagaacggcccaaactgatagtcgcgtaaggggtacagcgcgacggtcacgtgggcga
ggccgtggtaaattcacttcggttggcaaggcgaacacgtcccaaaaataa
DBGET
integrated database retrieval system
