Daphnia magna (water flea): 116918898
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Entry
116918898 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116918898 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116918898
03036 Chromosome and associated proteins [BR:
dmk03036
]
116918898
Membrane trafficking [BR:
dmk04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116918898
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116918898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
PH
Motif
Other DBs
NCBI-GeneID:
116918898
NCBI-ProteinID:
XP_045027388
LinkDB
All DBs
Position
LG3:12150645..12163433
Genome browser
AA seq
1739 aa
AA seq
DB search
MDTLGEVIIGNKIYSARYAQPPRSVLEQEASGAETGIQSTSDAICTDTIVADGDATGAVS
TAVNDCSWLQQDRRIGSLLTTDLDELPVVQEPDYINLRVGAESVSVDEGKMTPAVYGKGP
TGGHNVFTNSYGREENIYEEINELQRRLALDKQSVAMPTHTPQHLPRFQQATTSLVDEVM
DEVARVRLGHNTVLNQLNLDLEHFLKPQTPEPSPSPPPLDQQENLAQDLGAADEFAKNRS
RSIGEVVSDKVTPVFSTPPTGRLPRTFISHNRSNSSVSFTMSQFIGAGERSLVRCESLDF
GVHDGGLQRRPSVISRGSNSTSSSVASSSRSDTRQSIRNLHQGLQHGIQGLADWTEKCGQ
MLAKRSKKVIAFVNKDRRSACDAEPTADSSAIAASATNDCLVPSPTLGSSSTNGSDVVDC
DNRIYEDIDHNSFGSNSMAGSEALPDSLAVSSCTTTATADSGFSPGQTSGRQNHQVPCGS
DDSWGSGEFETFSSDEPVGEDDDDPDKIPSPMRSGTLRALLTGKSIRDKLRGARSRSREE
DQSNAGAVETPIAGRGVSSPPSGERRFSRLFSLRRSSASLPSPGSFSFISDNTVSPISSS
PCLSASNNLAADLTTKTSSPSGRPLPLPQLLEEDEIMAGLGLGNGSSTLGSLFQRRHQPP
TLPPIPANLDAEQLKRRYIVATIIHSENSYVASLQRLVNEYKKPLEESNPPILGANKIST
LFHRLPEILQCHTLFRLALSECARTWDKEEKIGDVFVANFSKAVVLDIYSDFINNFSQSL
EVAKQESKRKSALADFLKVKQISSHDRLSFFGLMVKPVQRFPQFILLLQDLLKHTPQGHQ
DRMSLQLALTQLESLAELLNERKRETEQYQAFRDTLRHVSGKFSLRPLADNNRYLLRQDN
VNLVEFNQSGMISKTKERRLLLLNDLLVCVTVASKSGDDYRNSSERLTLKWAFPITDVEV
EDTSTSPTLSRLLSSGSNLRSSEAVSGVDNLCQEMNQLMHDYDVITRIDSLIGSLHGQYE
TLDRVAARAALNRIQQQLQQKDEEMAWIDSCCLQLIVRNRSGKEEKFTFQTESPDIRKDW
VIELRLAQLALDPKNSPSWDVLEQERRPSTKMPLFVKSLPVYKSHHETEVRCGCFYTTLV
RKSVPSVRCLGPRLHSFLWIVTSDGISSHVTLLTSQQPVGPSLKAAGAFSLVEVKVTSVE
FSPGTQALYDNLETTDQIRGDLVWLGTESRRILLYSAHEPGKTGQVGSLSLPAPVVQLRY
HCDQMFVALANGTVAIFKRNNSEGIWELNSPATLVTLGDEPVVSLLPISSALYAACGRSV
FVLDGITGETLRNFSVQQDHSGTIHDMAHSGVGLWISLRHSSTICLYHTETFRHLQDINV
ASNVNRLSKQTSQNVYVTALMACKGLLWVGTNVGIALSIPLPRLEGVPIISGRANVSHHA
HSGPITVFLTLQMRSKNPVPTPYASMPVQQHQMASSLPPSGTIHEESENESTSPRSKPMV
TVSQLASQFNTVPKARSPALDSPLILRRRSKESSPLMAKRLSRTLPRGHVSTATECDIFG
LYGELMNIKDYEESDGGGLMGGGGGAGAGNVSSMYETLRRSDPDLAAIPAKVSTLDRRLH
MKAARPRSLDLSNWSVDSRSSLYTTSSGSEDSSSHTMTPSATMLTMSSGQASTLKRGHQR
GVDPAKSTMDAPRTVLTLSGGRGYVYTYQRNQQDGERKHSVPSPANTNDAHIILWEMKL
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggacactttaggcgaagtgatcatcggcaacaagatctattctgcccgctatgctcaa
ccgccaagatccgtcttggaacaggaagccagtggagctgagacggggattcagagtacg
agcgatgccatttgcacggacactattgttgctgatggtgacgcaactggcgccgtctcg
acggccgtaaatgattgttcctggctccaacaggatcgtcgtataggctcactcctaacg
acagatcttgatgaattgcctgtcgttcaagaaccggactacataaatctccgcgtcgga
gctgagtccgtttccgtcgatgaaggaaaaatgactccggccgtgtacggcaaaggtccg
acaggaggccacaatgtatttaccaattcgtacggacgcgaggagaatatttacgaagaa
atcaacgaactgcaacggcgcttggccttggataagcaatcggtcgccatgccaacgcat
acgccacaacatttgccgcgtttccaacaagcgacgacgagtttggtggacgaagtgatg
gatgaggtggctcgcgttcgacttggccacaatacagttctcaatcaactgaatctcgat
ctggagcatttcctcaaaccacaaacacccgagccgtcaccgtcgccacctccgctggat
cagcaagagaatctcgcacaagatttaggcgcggccgatgagtttgccaagaatcgatcg
cgtagcatcggggaagtagttagtgataaagtgacaccggtgttttcgactccaccgaca
ggcagattgccacggacattcatctctcataatcgttcgaattcgtccgtttcgttcacg
atgtcgcaattcatcggtgctggggaacgatctttagtgcgttgtgaatctctcgatttc
ggtgtacacgacggtggacttcaaagacggccgagtgtcatttcacgcggatctaattcc
acctcgtcatctgtggcatccagcagtcgttcggatacgcgccagagcatccgcaacctt
caccaaggcctccagcatggaatccaaggcctcgctgactggacggagaagtgcgggcag
atgctggccaagcggagtaagaaggtgattgccttcgtcaataaagatcgacggtcagcc
tgtgacgccgaacccactgccgattcttccgctatcgccgcctcagctaccaacgactgc
ctggtcccttcacccactcttggttcgtcttcgacaaatggaagcgatgtggtggactgc
gacaacaggatttatgaagacatcgaccacaactcgttcggcagcaattctatggccggt
tcggaagcgttgccagatagtttggctgtttcgtcttgtaccacgaccgccaccgccgat
tccggtttctcgcctgggcagacaagtggacgccagaatcatcaagttccatgtggctct
gatgatagctggggatctggcgaatttgaaacattctcttcagatgagcctgtcggcgaa
gatgacgacgatcccgacaaaattccttcgccaatgagatcgggaactttgcgggcgttg
ctgacgggtaaatctattcgtgataaattacgtggagcgcgtagtcgcagtcgcgaggaa
gatcaatcaaatgctggagctgtcgagacgccgatcgctggacgcggtgtcagttcgcca
ccgtccggcgaacgacgattttctcgcctgttttcgttgagacgttcctcggccagtctc
ccgtctcctggtagcttcagcttcatcagtgacaacaccgtctcgcccatctcgtccagt
ccgtgtttatccgccagcaataatctagcagccgatttaactacgaaaacgtctagccca
tccggccgaccgctgcctttgccgcagttgctggaagaagacgaaatcatggctggattg
ggtttaggcaacggtagctctactttaggctcgctgttccagcgacgtcatcagcctccg
acgttgcctccgattccagccaatctcgacgcggaacaactgaagcggcgctacattgtg
gccaccattatacacagcgaaaattcttacgtcgcctcgcttcagcgtcttgtcaacgaa
tataagaaaccgctggaagagagcaatccgcctatacttggtgcaaataagatatcgacg
ctgttccatcgcctgccggagatcttgcagtgtcacacattgttccggctagcgttatcc
gaatgcgcccgtacgtgggacaaagaagagaaaatcggcgatgtctttgtggcaaacttc
tccaaagctgtcgtcttggatatttatagcgatttcattaataatttctcccaatcgctg
gaagtggccaaacaagaatccaaacgcaaatccgccctcgctgatttcctcaaggtcaaa
cagatatcctctcatgatcggttgtcgttcttcggtctcatggtcaaacccgtacaaaga
tttcctcagttcattctcttacttcaggaccttttgaagcacacgccacaaggccatcaa
gaccgcatgtccttacaattagccctaacgcaactggaaagtttggcagagttgctcaac
gaacgaaagcgtgaaacggagcagtatcaggctttccgtgacacactgcgtcacgtttcg
gggaaattctcactacgcccactggctgataataatcgatacctcctccgccaggataac
gtgaatcttgtggagttcaaccaaagtgggatgatatccaagacgaaagagcgacgtttg
ctgttgttaaacgatttgctcgtctgcgtcactgtggcctctaaatcaggagacgattat
cgcaactcttccgaaagactcacgctcaagtgggcattccccatcaccgacgttgaggta
gaagacacgagcacatcacccacactcagccgcctactttcatccggctccaatttacgt
tcatcagaagccgttagtggtgtggacaatctctgccaagagatgaatcaactgatgcac
gattacgacgtcatcacgcgtatcgattcgttgattggttcgcttcacggccagtatgag
actttggatagggtcgcagcaagagccgctttgaatcgcatccagcaacagctgcaacaa
aaggacgaagaaatggcttggatcgattcctgctgcctacagctgattgttcgcaatcgg
tccggtaaagaggaaaagttcacgttccaaacagagtcccctgacattcggaaagattgg
gtgatcgaactgcgtctggcgcagttggctttagatcccaaaaattctccctcgtgggat
gtactcgagcaagaaagacggccttccacaaagatgcctctctttgtcaaatcgctgccc
gtctataaatcgcaccatgaaaccgaggtgcgttgcggctgcttctatacaactctagtt
aggaaatcagttcctagtgtccgctgcttgggaccgcgcctgcacagttttctgtggata
gtcaccagtgacggtatcagcagccacgtgacgttgttaacgagccaacagccagtcggc
ccatctttgaaagcagctggtgcttttagtttggtggaagtcaaagtgacgtcggtcgag
ttctcgcctggaacgcaagcgctgtatgataacctcgaaacgacggaccaaatccgtggc
gacttagtttggttgggaacggaaagccgaaggatattgctttactccgcacacgaacca
ggcaaaacgggacaagtgggatcgttgagtctcccggcgcctgttgttcaactacgatat
cactgtgatcaaatgtttgttgccctggccaacggaactgtggccattttcaagcgcaac
aatagtgaaggtatctgggagctcaactcaccagccacgctggtcacgctgggagacgag
ccagttgtatcacttcttcccatcagttccgccttgtacgccgcatgtggtcggagtgtc
tttgtccttgacgggatcacgggggaaacactgcgcaatttcagtgtgcaacaagatcac
agcggaacgatccatgacatggctcattcgggtgttggtctttggatatcattgcggcac
agtagcaccatctgtctgtaccatacggaaacttttcgacatttgcaagacatcaacgtg
gcgtccaatgttaaccggctctccaagcagacgtcacagaatgtctacgtgacagcccta
atggcctgtaaaggtcttttgtgggtagggaccaacgttggtatagccctcagtatccct
cttccacgactggaaggtgtgccgatcatcagtggccgggccaacgtatctcatcacgct
catagcgggccaatcacggttttcctgacgctgcaaatgcgaagcaaaaatcccgttcca
actccttatgcttccatgcccgttcagcaacatcagatggcttctagtctaccacccagc
ggaaccatccacgaagaaagcgaaaatgagtcgacgtcgcctcgtagcaagcccatggtc
accgttagccaattggccagtcagttcaacacggtgcctaaagctcgttcacctgcgctg
gacagtccgttaatcttgaggcgcaggagtaaagaatcctccccgttgatggccaaacgt
ttgtcacgaacgttaccgagaggtcacgtttcaacggccaccgagtgcgacatctttggc
ctctatggtgaactgatgaacattaaggactatgaagagtcggatggaggcggtttgatg
ggaggtggaggaggcgctggcgctggcaacgtcagcagcatgtacgaaacgctccgtcga
agtgatccggacctggcagcaattccggctaaagtcagtacgctggacaggcggttacac
atgaaagcagctcgcccgcgctcgctggatctttccaattggtcggtagactcgcgctcg
tccctctataccacatcttccggatcggaggattcttccagccacacaatgacacctagc
gccacaatgttgacaatgagtagtggtcaagcgtcgacgttgaaacgcggccatcagcgc
ggtgtagatcctgcgaaatcgacgatggatgctcctcgaactgttttgacgctctctgga
ggccgcggttacgtctacacgtatcagagaaatcaacaggacggcgaaaggaagcactcg
gttcctagtccggccaacaccaacgatgcccacatcattttatgggaaatgaaactgtga
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integrated database retrieval system
