Daphnia magna (water flea): 116918901 Help Entry 116918901         CDS       T07514                                  Name (RefSeq) histone deacetylase 4 isoform X1   KO K11406   histone deacetylase 4/5 [EC:3.5.1.98] Organism dmk  Daphnia magna (water flea) Brite KEGG Orthology (KO) [BR:dmk00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:dmk03036]     116918901 Enzymes [BR:dmk01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      116918901 Chromosome and associated proteins [BR:dmk03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      116918901 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl HDAC4_Gln CobN-Mg_chel TFIIA Motif Other DBs NCBI-GeneID:  116918901 NCBI-ProteinID:  XP_045027394 LinkDB All DBs Position LG3:12176841..12193793 Genome browser AA seq 1225 aa AA seqDB search MTEQQLPQSNDMNSASPLSSSFVTSHRRPDLVVGPVVVSSSGSSVSSVATSASQSANNNN NLPNFREQAALQQQILQLKQQQHLQQQILLQQYQVQQQQLAQQHEKQLQEFLEQKKKAEE EARLERERHEKERLLALKNKEKREQSAVASSEVKQKLQEFVLNKKQREAAAAAAAGNGTT NAPSSSSAPYRAWTGAVPTLPAGHGCTTNKGSASQLSSGLGSTGSGIGSSNGVGGTSSSC SSTSSSGIVHPHPYRHPLLPGNFDDDFPLRKTASEPNLLKMRYKHRGAVERRNCSPLVAR RRGGAGGPQHHLSGGSGPALPGHHHLPPPPPLHHRQPPPPAHSSSLAMAAKRMAHLTSQE TGGSTPESPSGAASPLGSQHPSSGVVPVPEEISPSQYHLMASHGQGSISDLTLYSSPSLP NISLGRPAGANHHAAEPPGLAMVSEVVDMRAAFSVRMGLPATGGSHHALYQPPQPQHHHA HPHHQHHHLLMSSASPFFPPAPPDPGAGDYGSGGGSPESPGYIQKQMQLLEQAGHHTHVL MSGLYNGGAPITDAQVAQARLNKSGMRPLGRTQSAPLPLGHPLLQGAPHGVVPTVPLTQQ QFDQYVRERQIYEQQHQHNLLKQHIRQTVLTRAGSRSHVENVEEETEAAVAHEMSRDRGT PLPEIIDLTEHKLEEETDSDRHSCRDGLSPLQLRTSSSRSSLHASSGSAFAPRGHHAARP LSRAFSSPLVSLDPPGGGPSAGEGGTAVVPMTLAAAGWGPSAGGAKTGSTSTALAYDGLM LRHQCMCGSNSAHPEHGGRLQSIWARLQETGAVHRCLRLRSRKATAEELQSVHSDVYTML FGTEPAHRPKVDVNRFAELPMKNFVMLPCGGIGVDSDTTWNDIHTPSAARMAAGCVIDLA FKAAMGEIRNGFAIVRPPGHHAEAQQAMGFCFFNSVAIAAKQLRLRHKLERILIVDWDVH HGNGTQQIFYDDPRILYISIHRHDDGHFFPGTGNPLECGTDDGLGFNVNIAWSGGLNPPL GDAEYLAAFRALVMPIAQDFDPEIVLVSAGFDAATGHPSPLGGYQVSAACFGYMTRQLME LANGKLVMALEGGYDLPAICDASHECVRALLGDEPVPIRQEELARRPCQNAIDSLHKVIS IQQPHWPTIKRYAYSVALSAYEVEGVGRSRSYSSGNGGGSLEGGEDSETLSAMAGLSVCR TDSSKSIASSSRELSQEPMDQDDSK NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atgaccgaacagcaattgcctcaatcaaacgatatgaattcggcatcaccgctcagcagt tcgttcgtgacgtcgcaccgacggcctgatttggtcgtcggtccggtcgtcgtctcttct tccggctcgtccgtttcttcggtagccacttctgctagccagtctgccaacaacaacaac aacttgcccaatttcagggaacaggcggccctccaacagcaaattttgcagctcaagcag cagcagcacctgcagcaacaaatcctcctacagcagtaccaagttcagcaacaacagctg gcccagcaacatgagaaacaattacaggaatttctggaacagaagaaaaaggctgaagaa gaggctcgactggaacgcgaacgtcacgaaaaggagcgcttattggcgctcaagaataag gagaaacgagaacagagcgccgtcgcttcttccgaagtcaaacaaaaactgcaggaattc gtgttgaacaaaaaacaacgcgaagcagccgccgccgccgctgccggtaacggaactacc aacgcgccgagctcctcttcagcaccgtaccgagcgtggaccggagctgtgcctacttta cccgctggccacggatgcaccaccaacaaaggatctgcgtcgcaattatccagcggattg ggctcaacaggtagcggcatcggcagcagcaacggcgtcggcggcaccagctcgtcgtgt tcgtcgacttcatccagcggcattgtccatcctcatccctatcgacacccactgcttccg ggcaatttcgacgacgacttcccactccgcaaaaccgcgtcggaaccgaacctgctcaaa atgcggtacaaacatcgcggcgccgtcgagcgacgcaactgcagtccgttggtggctcgg cggaggggcggcgctggtggtccgcaacaccatctgtccggaggcagcgggccggcactg cccggccatcatcatttgccgccacctccgccgctgcaccaccgtcaacctccgccgcct gcccactcttcttctctcgccatggccgccaaacggatggcgcacctgacaagtcaagaa acgggcggaagcactccggaatcgccttccggtgctgcatctccgcttggctctcaacat ccttcatcaggggtcgtgcctgtacctgaggagatcagtccgtctcagtaccacctgatg gccagtcacggccagggaagcatttcggatctgacgctctattctagcccgtctttacca aacatatctcttggacgtcccgcaggagccaaccatcacgccgccgaacctcccggattg gccatggtcagcgaggtggtggacatgcgcgctgccttctccgtccgcatgggcctgccc gcaacaggaggcagccatcacgcgctttatcagccaccgcaacctcaacaccaccacgct catccgcaccatcaacatcaccacctcctcatgtcgtccgcttcgcctttcttcccgccg gcgccgcccgatcccggcgcaggcgattacggatccggcggcggaagccccgaatcgccc ggctacattcaaaagcagatgcagttgctggaacaggccggccatcacactcacgtcctg atgagcggactctacaacggcggcgcgcccatcaccgacgctcaagtggcgcaggcgaga ttgaacaaatcgggaatgcgtccattaggacggacgcagtcggctcctttaccgcttggc catccgctgcttcaaggagcgccgcacggagtggtgcccaccgtgccactgacgcagcag cagttcgatcagtacgttcgcgagcgtcaaatctacgaacaacagcatcaacacaatttg ctcaaacagcatatccgccagacggtgctaactcgggcgggtagccgaagccacgtcgag aacgtcgaggaggaaacggaagcggctgtggctcacgaaatgtcacgcgatcgtggcact cccttacctgaaatcatcgacttgactgagcataaattagaagaggaaacggacagtgat cgtcactcctgccgcgatggcctgtcaccccttcagctgcgtacgtccagctcaagaagt tcgctacacgccagttcaggttcggcttttgctccgcgaggccatcacgccgcccggcct ttatcgcgagctttttccagtcctttggtatcgctcgatccgcctggaggtggtccgtct gcgggtgaaggtggcacggccgtcgtgccgatgacgttggccgcggccggctggggtccg tcggccggaggggccaaaacgggcagcacgagcacggcgctagcctacgacggcctcatg ctgcggcaccagtgcatgtgcggcagcaacagcgcccatccggagcacggcggccgtttg cagagcatttgggcccgccttcaggaaacgggagcggtgcaccgctgcctgcgacttcga tctcgaaaggccacggccgaggagctgcaatcggtccattctgacgtttacacgatgctg ttcggcacggaaccggcccaccggcccaaagtcgacgtcaaccgcttcgccgaattgccc atgaagaatttcgtcatgttgccgtgcggtggcattggcgtcgattccgacacgacgtgg aacgacatccacacgccttccgccgcccgtatggccgccggctgcgtcatcgatctggcc ttcaaggctgccatgggcgagattaggaatggtttcgccatcgtccgtcctcctggccat cacgcagaagcgcagcaagccatgggattttgtttttttaattcggtcgccatagcagcc aaacagctcagactcaggcacaaactcgagcgcatcctcatcgttgattgggacgtccat cacggtaatggaacgcagcaaatcttctacgacgaccctcgcatcttgtacatttccatt catcgtcacgacgacggccattttttccctggcaccggtaaccccctggagtgtggcacc gatgacggactaggtttcaacgtcaacattgcctggtcgggcggactcaatccgccgtta ggtgacgctgaatatttggccgctttccgtgccctcgtcatgccaattgctcaagatttt gacccagaaattgttttggtgtcggccggattcgatgctgcaacgggccatccgtctccg ttgggtggctaccaagtgtcggccgcttgttttggctacatgacgcgccagctgatggag ttggccaatggcaaactggtcatggctctcgaaggtggctacgatttgccggccatctgt gacgcgtcgcacgagtgcgtccgtgccctgctgggtgatgaaccagtgcccattcgtcaa gaagagctggccagacggccgtgccaaaatgccatcgattcacttcacaaagtgatctcg atccagcaacctcactggccgaccatcaaacgctacgcctattcggtcgcattgtcggct tacgaggtggaaggagtcggacggagccgcagttacagcagcggcaatggcggcggatcg ctcgaaggcggagaagacagcgaaaccctatcagcaatggccggcctatcggtctgccgg acagatagcagcaaaagcattgcgtcatcgtccagggagctgtcgcaagagccgatggat caggatgattccaaatga

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