Daphnia magna (water flea): 116918939
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Entry
116918939 CDS
T07514
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116918939
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116918939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_1
TPR_19
WDR55
Beta-prop_IFT122_1st
TPR_2
Beta-prop_EIPR1
ANAPC4_WD40
TPR_17
TPR_14
Beta-prop_SCAP
Beta-prop_WDR19_1st
TPR_11
TPR_6
NBCH_WD40
TPR_9
Beta-prop_WDR35_TULP_N
ANAPC3
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
116918939
NCBI-ProteinID:
XP_032780626
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Position
LG3:complement(3985685..3988916)
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AA seq
682 aa
AA seq
DB search
MEQYKWLSKPLVIHYLRSKEINDSLIPIYQPKLSSMKSLIDRLGLDYELSGHSGCVNCLE
WNKDGSILASGSDDLHILLWNPFLKRKIASIDTGHQGNIFSVKFMPQTKDGLVASAAGDG
RVKIHWVEHASAINTTPQTSLQCNCHVGRVKRLATAPDVPYLLWSGAEDGTVMQFDLRMP
HACTNGPSNILINLLSHTGKQAEVKSIAINPVRTEQLVVGANDPFIRLYDRRMIKITSVP
FCSERANRGRQYSLVTSSQSEESRSAIPLGCAQYFAPGHLPQKLDDYRRRFRSLASTYVT
FDSSGRYILANLGGEQIYLYDCLTPKFPITQVPLLDKEPFHGTEIFTLPPEIEQIKIQAN
AAFQQRQYTTAIGLYSKALMRAPNSPVLYSNRAAACMKRNWDGDTYAALRDCVTALKIDP
NQIKPFHRLARCLLDLGQPRLADQAFQLFREKFPQQANSSLLNTLHLEVQKKLELQEQRT
ERETARRQMDDESDLLEDGDTSSSITENEKIWRTHYWDYTSRYCGHCNTTTDIKEANFFG
DDGQYILAGSDDGCFFIWDRNTGIVERVLRGDESIVNCLQPHPFTCLLASSGIDSAVRIW
SPLPQERAVQDRLGGVVHDAESAAVANQRRMNADPFEMFLMNMGATAEDAMPDITVRARR
PAASPDEDQEEDSRAAIQCRQS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatataaatggctcagtaaaccattggtgatacattatctgagatccaaagaa
ataaatgactccttgataccaatataccagccaaaattgtcatcaatgaaaagcctgata
gataggcttggattagattatgaacttagtggtcacagtggctgtgtcaactgccttgaa
tggaacaaagatggttcaattctagcatctggttcagatgaccttcacatccttctctgg
aatccatttctgaagagaaaaatagcttctattgataccggtcatcaaggcaatatcttt
tctgtaaagttcatgccccaaacaaaggatggtctagtggctagtgcagctggggatgga
agagtcaaaattcattgggttgaacatgcttcagcaataaacaccactcctcagactagc
ctgcaatgcaactgtcacgtgggtcgagtcaagcgtttagccacagcccccgatgttcca
tacctactttggagtggggccgaagatggaacagtgatgcaattcgatttgagaatgcct
cacgcatgcacaaacggcccgtccaacattttgattaatttactaagccatacagggaaa
caggccgaagtgaaatctattgctattaaccctgttcgaactgagcaattggttgttggg
gctaacgatccgtttattcgtctatatgatcgacggatgattaaaatcacctcagtcccg
ttttgctccgagagagcgaaccgtggtagacagtactctctcgtaactagttcacaaagt
gaagaaagccgctctgcgattcctcttgggtgtgctcaatattttgctccaggtcatcta
ccacaaaagttggatgactatagacgccgctttcgctcactggcgtcgacgtacgtgaca
ttcgactcgtcaggtcgatatattttggcaaatctgggaggcgaacagatttatttgtat
gattgtttaacccccaaatttccaataactcaagtgcctcttttggacaaagaacctttc
catggaactgaaattttcaccttaccaccagaaatagaacaaataaaaatacaggccaat
gccgctttccagcaacggcagtacaccacagccattgggctgtacagcaaggcactgatg
agggcaccaaattcaccggtgctgtacagcaatcgcgctgcagcttgcatgaaacgtaat
tgggatggagatacttatgctgctctgagagactgcgtcactgctttaaagatcgatcct
aatcaaataaaaccctttcatcggttagcgcgatgtctcctagatcttggccaaccgcgg
ttggcagatcaggcattccaattattcagggaaaaatttcctcagcaagcgaacagctcc
ctgctcaataccctacaccttgaagtccagaaaaaacttgaactacaggagcagcgcaca
gaaagagaaactgctcgcagacagatggatgatgaatcagatttgttggaagacggcgac
acttcatctagcattacggaaaatgaaaaaatctggcgaacacattactgggactacacg
agccgttattgcggtcattgcaataccacaactgacattaaagaagcaaattttttcgga
gatgatggacagtatatattagctgggtcagatgatggatgtttttttatctgggatcgt
aatactggaatcgtcgaacgagtgctgcgaggcgacgaatcgatcgttaattgccttcag
ccccatccgttcacctgcttgctcgcctcatcgggaatcgattccgctgttcgcatttgg
tctccgttaccacaggaaagagccgtccaagatagattgggtggcgtggttcacgatgcg
gaatcggcagctgtggccaaccaacgacgcatgaacgctgaccctttcgaaatgttcctt
atgaacatgggtgcgaccgccgaagatgccatgccagatatcacagttcgcgcacgccgt
ccagctgcatcaccagatgaagaccaggaagaagattctcgcgcagccattcagtgtcga
caaagttaa
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