Daphnia magna (water flea): 116918965
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Entry
116918965 CDS
T07514
Name
(RefSeq) transcription factor Sox-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116918965
Transcription factors [BR:
dmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116918965
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116918965
NCBI-ProteinID:
XP_032780677
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Position
LG3:2951904..2954132
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AA seq
394 aa
AA seq
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MMDMSVMQSSPGLLMAHHQQQQHHHHQQQQAVAMSMMQQQQTSPGNGKNVGASVGLTGVL
SDHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLNEDEKRPFIDEAKRL
RALHMKEHPDYKYRPRRKPKPSMANKTAAYSFPMPYSLGGMNPHHHAAAAGLDTLSWLSA
AQHAASVQAASVNSTLSATTTTTNSTTAGSLSSSASSVASVTPSLDLDKSRLFGFPSPYG
SHQHHYYGMAGLPGMPGLAGLAGLPNLNANNNGHRMSPDSNSPVSRMDGFGMKGSPSPVA
SVNSTSGGNGSNSNNGCVVSTSAGIPQHHQQQQSPAALYSSLMYTKASAAAAASYHQAAQ
AAAAAAGMQYPVAPAGYPSLDQLAGLRRPVPVLY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatgtcagttatgcagtcttcacctggcctcttgatggctcatcatcagcaa
cagcaacaccatcaccatcagcaacagcaagctgttgcaatgagcatgatgcagcaacaa
caaacatcgcccggaaacggcaagaatgtcggcgcaagcgtaggcctgaccggcgttctt
tccgatcacatcaagaggcccatgaacgccttcatggtctggtcccgtcttcagcgccgc
aaaatcgcgcaggacaatccgaaaatgcacaactcggaaatatccaaaagactcggtgcc
gaatggaaactgttgaacgaggacgaaaagaggccatttatcgacgaggccaaacgttta
agagctctgcatatgaaggagcatccggactacaagtaccgaccccgtcgcaaacccaag
ccgagcatggccaacaaaacggcggcctattcgttcccgatgccctactcacttggcggt
atgaacccgcatcatcacgcagccgccgccggactcgacaccctctcttggctatcggcc
gcccagcacgccgcttccgttcaagccgccagcgtgaattcgactttatcggccacgacg
accaccaccaacagcacgacggccggcagtttgtcgtcatctgcttcatctgttgcgtcg
gtgactccttcgctcgacttggacaagagccgcttgtttggattcccttcgccgtacggc
tctcaccagcatcactattacggtatggctggacttccaggaatgcccggattggccgga
ttggccggacttcccaatctcaacgcaaataataacggacacagaatgtcaccggacagc
aattcgcccgtcagtcgaatggacggattcggtatgaaaggatcgccatcgccagttgcg
tctgtcaactcgacatccggcggcaatggaagtaatagtaacaacggctgcgtcgtgagt
acgtcggccggaatccctcaacatcatcaacaacagcaatcaccggccgctctctattcg
tcgttgatgtacaccaaggctagcgctgcagccgccgcttcttaccaccaggcggctcaa
gcggccgctgccgccgccggaatgcaatatcccgtcgctccggctggctatccctcccta
gatcaactggctggactacgaagacccgtacccgttctctactga
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