Daphnia magna (water flea): 116918974
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Entry
116918974 CDS
T07514
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116918974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116918974
04121 Ubiquitin system [BR:
dmk04121
]
116918974
03036 Chromosome and associated proteins [BR:
dmk03036
]
116918974
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116918974
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116918974
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116918974
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116918974
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116918974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_6
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116918974
NCBI-ProteinID:
XP_032780686
LinkDB
All DBs
Position
LG3:complement(2912168..2915012)
Genome browser
AA seq
535 aa
AA seq
DB search
MANVNDKFVRSRQSFLELGKHLQCQSCEKLAYSPHILGGCDHTFCQSCTNIHCGKPCPVC
GVVSLPDTCKPDTVIENLIEAYLPMAEYLGIDVTPAVHNDIHLNKELSKKLVPATPASTI
NRPVKTPKNSLKPENFSTPVHTIKRCGRTGSLSESLNTSISGTSASRIDKRNAKGETQLH
VACLKQDVQRIKELLGLGANPNTQDNAGWTPLHEVVGCGNEEIVTLLVENGANPNIPGGQ
NETSLHDAVACNRTNIVRLLVSHGADVNARNSRGLTPKDLCSKDNEDMTAALQTSTIMPA
APSNPDRTNARTTLQTICLFVLNMEKKSHPGLSKLARTLNFKISTNYSSSVTHVAVRLDD
PCNAIKANAHFYSAVLQGQFIVDFKWIEESAKLERLIDVCQYEIDGSLNRAPPGGSLSRL
NVANQLPGLFNNCSFYLNGLFSTPSKADITQWIKHGGGTLLTRSPNPESISPCEKIPYHA
SPTSPLVQCSHFILYDSRAKAQPTLKYNMSHVKSLSVDWLVASIENFSLVDPFGF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtaaatgacaagtttgttagaagccgtcaatcatttttggaacttgggaaa
catcttcagtgtcaatcttgtgagaaactggcttacagcccccatattctaggaggatgt
gatcatactttttgtcagtcatgcacaaacatccattgtggaaaaccgtgcccagtttgt
ggcgttgtctcgttaccagacacctgtaaaccagatactgttattgaaaatctcatagaa
gcgtacctgcctatggctgaatatcttggaattgatgtaacaccagcagttcacaatgat
attcatttgaataaggaattaagcaagaagctagttccagcaacaccagcatcaacaatc
aacagacctgttaagacaccaaaaaactcacttaaacctgaaaatttttcaactcccgtt
cacacaatcaagaggtgtgggaggacaggaagtctcagtgaaagtttaaatacttcaatt
agtggaacatctgcctcaagaatagacaaacgtaatgcaaagggtgaaactcaattgcat
gtggcttgccttaaacaggatgtacaaagaatcaaagaactgttaggactcggggctaat
ccgaacacgcaagataatgccggatggacgcctttgcacgaagtagtcggctgtggaaac
gaggagatagtaactctactcgtggaaaatggggcgaaccccaatattcctggtggccag
aatgagacatctcttcacgatgccgttgcctgtaaccgaaccaatattgtccggctcctc
gtgtcacacggcgcagacgtaaacgcccgaaacagtcgagggcttactcctaaagactta
tgctcaaaagacaatgaagacatgactgctgcccttcaaacttcgacgatcatgccagca
gctcctagcaatcccgatcgaaccaacgcccgtacaactttacagacaatttgtcttttt
gttcttaacatggaaaaaaaatctcatcctggattaagcaaacttgctcgtactcttaat
ttcaagatatcaactaactattccagctcggtcactcatgtggctgtccggttggatgat
ccttgtaacgcaatcaaggctaacgcgcatttctactctgctgtccttcagggccagttt
attgtcgattttaaatggatagaggaaagcgcaaagttggaacgtttgatagatgtttgc
cagtatgaaattgatggaagtttgaatcgggcaccaccgggcggatctctcagtcggtta
aatgttgctaaccaactacccggtctgttcaataattgctccttctacctcaacggcctg
ttctccacacctagcaaggccgacattacgcaatggatcaagcacggtggtggtacattg
ttgacgcgtagcccaaatccggagagcatctctccttgtgaaaagatcccgtatcatgcc
tcgcctaccagtccattggtccagtgctcacatttcattctatatgattctagggccaag
gcgcagccaactctcaagtataacatgtctcacgtaaaatcgctttccgttgattggcta
gtggcgtccatcgagaatttttctcttgtcgatcctttcggattttga
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