Daphnia magna (water flea): 116919004
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Entry
116919004 CDS
T07514
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116919004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116919004
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-60S particles
GTPases
116919004
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
RsgA_GTPase
FeoB_N
PI3K_1B_p101
Nop14
Paf1
Motif
Other DBs
NCBI-GeneID:
116919004
NCBI-ProteinID:
XP_032780732
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All DBs
Position
LG3:2794536..2797210
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AA seq
680 aa
AA seq
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MGKKTSPLGGKKGIQLGRAIIKDRFGKGKGKSRKGDPTMLHTSELDDGYDWGRLNLQSVT
EQSQLDEFLATAELAGTEFAAEKLNVTFAKTQATYGLLSAEEKTKVKLAQAENAANLKIP
RRPLWDRTTSGEELQQLEREAFLAWRKGLSELQEIEGVTLTPYEKNLDFWRQLWRVIERS
DVVVQIVDARNPMLFRCEDLERYVVETSQEKMNLILINKADFLSEKQRQLWAEYFDNINL
PVAFFSALEENQNNQLRKLKLLEEEEEEIIEEEEIEDESEYENEEEDEEEDEEEEEEENA
NEDANEEDNHVCEGGSKSDNHNEKFSVVENKPVTDQQITEETIGTSVEQAKETKNNLSIK
VQSDPLKIGSQIKNSTRLLSGAELVELFKNIHKGRKVQEGRSVVGLVGYPNVGKSSTINS
LLTYKKVSVSATPGKTKHFQTINIDDDLILCDCPGLVMPSFVSTKHEMIIWGILPIDQMR
DHVGPVNLIASLIPRSILESTYGIFIPKPSEGEDTTRPPTSEELLNAYGFMRGFMTARGL
PDNPRSSRHILKDFVQGKLLYCNPPPETDASEFQEFTRANRSRPLKPTATPTPFQLRVTK
TNYNNSQSIDQAFFSQSLSTAHSKGRASTPGETHTKGVTANLNFPGSCSNLNELGDKPWK
KHNKKHKREKLRRVYAHLDQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaacgagtccattgggtgggaaaaaaggcattcaacttggaagagcaatc
attaaggatcgctttggcaaaggaaaaggcaaaagtcgcaaaggtgatccgactatgtta
catacatcagaacttgatgatggttatgattggggtcgtctgaatttgcaatctgtgaca
gagcaaagccaattagatgaatttctagcaaccgcagaactagcaggaactgagtttgca
gctgagaaacttaatgtaacttttgcaaaaacacaagcaacatatggcttgctcagtgca
gaggagaaaactaaggttaagcttgcacaagctgaaaatgcagctaaccttaaaatacca
agacgaccattgtgggatagaacaactagtggggaggaactacaacagcttgaaagagaa
gcttttctggcatggaggaagggtctttctgaattgcaggaaatcgagggtgtgacacta
acaccttatgaaaaaaatttggatttttggaggcaactgtggcgtgtgattgagagaagc
gatgtggttgtccagattgtcgatgctcgaaatcccatgttgttccgttgtgaggatcta
gaacgatatgtggtggaaaccagtcaggagaaaatgaatttgattctgattaataaggcc
gattttttgagtgaaaaacagcgtcagctctgggccgaatactttgataacattaattta
cccgtggcttttttctcggcattagaagagaatcaaaacaaccagttacgcaaattaaag
ctgctggaagaagaagaagaagaaataattgaagaagaagaaatagaagatgaaagcgag
tatgaaaatgaagaggaagacgaagaggaagacgaagaggaagaggaagaggaaaacgca
aatgaagacgcaaatgaagaggataatcatgtgtgcgaaggtggaagcaaaagtgataat
cacaacgaaaaattcagtgttgtagaaaacaaacctgttaccgatcaacaaataactgag
gagacaatagggacatcagtggagcaggctaaagaaactaaaaataacttgtcgataaaa
gttcaaagtgatccactaaaaataggcagtcaaattaaaaacagtactcgattactctct
ggggcggagctcgtggaactgttcaagaacattcacaaaggaagaaaagttcaagaaggg
cgatcagttgttggacttgtgggatacccaaatgtcggaaagagttccaccatcaactct
ttactcacgtacaagaaagtgtctgtctcggctactcccgggaaaactaaacattttcag
accataaacatagatgacgatttaattctctgtgattgtcctggtctagtgatgccaagt
ttcgtttcgacaaaacatgaaatgataatttggggcattttaccgattgaccaaatgcga
gatcatgttgggccagtaaatttgatcgcttctcttattcctcgctctattctggaatca
acctatggcatctttattccaaaacccagtgaaggggaagacacaacccgacccccaact
tccgaggagttacttaatgcctacggattcatgagaggctttatgacggcgcgaggcttg
cctgataatcctcgttcatcccgccacatcttgaaagatttcgttcagggaaaattgctc
tattgcaatccacctccagaaacagatgcgagtgaatttcaagaatttactagagctaat
agaagcaggccacttaaaccaaccgcaactccaacacccttccagttgagagtcaccaaa
actaactacaataattcccagtcaattgaccaggcattttttagccaatctttatcgact
gcacacagtaaaggtcgcgcatctactcctggtgaaactcatacaaaaggagttaccgca
aacttgaattttccgggttcatgcagtaacctgaatgaacttggtgataaaccttggaag
aagcacaacaaaaagcataagcgcgaaaagcttcgaagagtatatgctcatttagatcag
tga
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