Daphnia magna (water flea): 116919056
Help
Entry
116919056 CDS
T07514
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116919056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116919056
Membrane trafficking [BR:
dmk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116919056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
BTB_2
BTB
Motif
Other DBs
NCBI-GeneID:
116919056
NCBI-ProteinID:
XP_045027438
LinkDB
All DBs
Position
LG3:6923626..6929621
Genome browser
AA seq
745 aa
AA seq
DB search
MSGDHRTVIKGSPSQYVKLNVGGSLHYTTIGTLTKHDTMLRAMFSGRMEVLTDSEGWILI
DRCGKHFGIILNFLRDGSAPLPESPRETAELLAEAKYYCVAELVNACENALKRRERERDV
EPSCRVPLVTSAREEQMLISTSAKPVVKLLINRHNNKYSYTSASDDNLLKNLELFDKLSL
RFSGRVLFLKDVIGSQEICLWSFFGHGKKVAEVCCTSIVYATDKKHTKVEFPEARIYEET
LNILLYEHRPGPDADLMQATSTAKDFSGIISKASIKVLAESDEQEVVREIQEFYADFFAV
GPHLFSLNLEKPIHGMEWNPNCLQRSVQGVLSVLLSLKKNPIIRYQNFSSLARRLAENIR
DTILKESSLFHFHRGESIPLLLILDRRCDPITPLLNQWTYQAMVHELLSIKNNRVSLVGV
PGAPKDMSEVLLSAEQDEFYANNMYLNFGDIGQTIKSLMDEFQMKAKSHQKVESIADMKA
FVENYPQFKKMSGAVTKHVTLVGELSRLVTQHNLLEVSEAEQELACQEEHTQSLTKIRRL
LVTDQIRDLDAARLVFLYAIRYHKHQSKDIVGLVDLLRRRGTPVRLIDCVEGILRYASSG
ETAGSSILTTNDVTKITEKIFKGLKGVENVFTQHSPVLKEIIDNMVKGRLSEEAFPTVGG
ESLPARIQDVVIFIVGGVTHEESFAVHQFCRANTGIRIALGGTLIHNSQSFISDMEAAVK
YLPAGNAKYPHNSAPSGSGRHSKLT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggaccatcgtacggtcatcaaaggtagtccatcccagtatgttaagctgaat
gtaggtggatctcttcactataccacaataggaacattgaccaaacatgacactatgcta
cgtgcaatgttcagtggacgcatggaagttctgacagactcagagggctggattttaatt
gatagatgtggaaaacattttggcataatcctgaacttcttaagagatgggagtgctcca
ctccctgaaagtcctagagaaactgcagaattattggctgaagccaaatattactgtgta
gcagagctagtgaatgcctgtgaaaatgcattgaagcggagagagcgagaacgggacgtc
gaaccctcttgtcgcgtgccgctggttacttcagctcgcgaagaacaaatgttgatatcg
acttcagcaaaaccagttgtgaagttgcttatcaaccgccataacaataaatattcgtat
acgagcgcttccgatgacaatttgctcaaaaatctagaactatttgataagttaagtttg
agattcagtggacgggtccttttcctgaaagatgtaattggatctcaagaaatctgcttg
tggagcttttttggacatgggaagaaggtagcggaagtgtgttgcacaagcatcgtctac
gctacggataaaaagcataccaaggttgaatttccggaggcaagaatttacgaagaaacc
ctaaacattttgttgtatgaacaccgtcccggtccagatgctgatttaatgcaagcaact
tcaaccgcaaaagattttagtggaatcatttccaaggcaagtattaaagtgttggctgaa
tcagatgaacaggaagtagttcgggaaattcaagaattttatgcagatttttttgcggtt
ggacctcacctattttcattaaatttggaaaaacctattcatggtatggaatggaaccca
aattgtttgcaaagatctgtccaaggtgttttaagtgtcttgttatccttgaagaaaaat
ccaatcattcgataccagaatttttcttctttggctcgccgtcttgccgaaaatatacgt
gacacgattttaaaggagtcttccttattccattttcacagaggagaaagtatacctctc
ttacttattctggatcgacgctgtgatcctatcactccgttacttaatcagtggacatat
caagctatggtgcacgaattgttgtccataaaaaataacagagtcagcttagtcggtgtt
cccggtgcacctaaagacatgagtgaagtcttgctctccgcagaacaggatgaattttac
gcaaataatatgtacctgaacttcggagacattggccaaaccatcaagtctttaatggac
gaattccaaatgaaagctaaaagccatcaaaaagttgaaagcatagcagatatgaaagca
tttgtcgaaaattatcctcagtttaagaaaatgtcaggggcagtcacgaaacatgtcaca
ttagtaggagaactctcacggctggtgacgcagcacaatcttctagaagtctccgaagct
gaacaagaactggcgtgccaagaggaacacacgcagtcccttacaaaaattcgtagactg
ttagttactgaccagattcgagatcttgacgctgcccgactggttttcctttacgccatc
aggtaccacaagcatcaaagcaaggatatcgtaggcctagtggacttgcttcgacgtcga
gggacacctgtccgattaattgactgtgtggagggcatacttcgctatgctagttccggt
gaaactgctggttcgagcatcttgacgacgaacgatgttacgaaaatcacagaaaagata
tttaagggtttaaagggcgttgaaaatgtatttacacaacactcacctgtcttgaaggaa
atcattgacaatatggttaaagggcggttatctgaagaagccttccccactgtcggaggc
gaatctttgcctgcgagaatccaagatgtagtcatttttatagtgggtggagtgactcat
gaagagtcatttgcagtccatcaattctgtcgagccaacacaggaattcgaatcgcgctc
ggaggcactctaattcacaatagccagtccttcatatctgatatggaagctgccgttaaa
tatttgcctgctggcaatgcaaaatatccccataattctgccccatctggttctggtcgc
cattctaagttaacttga
DBGET
integrated database retrieval system
