Daphnia magna (water flea): 116919062
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Entry
116919062 CDS
T07514
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116919062
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116919062
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
IBB
Motif
Other DBs
NCBI-GeneID:
116919062
NCBI-ProteinID:
XP_032780821
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Position
LG3:2665936..2668867
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AA seq
838 aa
AA seq
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MLYPLSTCVTDIDVVNRNQSCIETTTISSKMAGGEQASHRPGLLKQQNKSHKTGRHRSKS
EIDKNNKGRVHVKLISKRKNQELKRDERRKKANQLRSKKREDILAKKRAIGGSDSAPFLS
AIIPIGESANLQKLLKQMKECDADAKVEITGCNIMHINIPRFRQNFSLIIPQPGDLYAAL
DACKVVDSVIFLVSPPSDSDSCVSHSTNNEGVLGFDSSGEELLSAIMAQGLPSPIFVVND
IDAISAKKRNDYKKLLLKQLDQMVPVEKLQVIENESDALRLFHQIGSQKQRPVYQRNMRC
HFLCEEVNFKQSLDDPTVGTLIVDGYVRYQPLNVNGLVHIPGWGDFQMERIEVQRNPGEF
IFLEEANPSLQETLKSENDPDPMNGEQTWPYQEEMDGQTLEDGKIEDNEEMEIKKRFPKG
TSEYQAAWIKDDDNDANQEDEKEEDDSDDWEDDCEDDCEDMIEDDDNESGTSSEEDEEDE
MESVEMEGGDTHVYDKKVNFADEENDLKRIKEAREDELFPDEVDTPRDTLAKVRFQKYRG
LKSFRTSPWDPKENLPMDYSRTFQFQNFQRTRKRVLKEERTGAKPGWYVRVHVKNVPSHL
PAGLQPGYPLALVGMLPHEQKMSVINLVLKRFKNTRDQQAIPSKERLIFHCGYRRYAASP
IFSQHTAANKHKYERFFRPESVVVATLYAPIMFPPASVLVFREKKDGSQIMTATGSVLSV
NPDRITVKRAVLSGAPFKVHRKSAVLRFMFFNREDIEWFKPVELRTKYGRRGHIREPLGT
HGHMKCVFDGQIKSQDTIMMNLYKRVFPKWSYDPNVAFPPALYNHEAEMEDAANQLMS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatccactatccacgtgtgtgacagacatagacgtagtaaatcgcaatcagtct
tgcattgaaaccacgactatttctagtaaaatggctggaggtgaacaagcctcacacaga
cctggtcttttgaaacaacaaaataaatcgcataaaactggcaggcacagaagtaaaagt
gaaattgataagaacaacaaaggtagagttcatgttaaattaatatcgaagcggaaaaat
caagaattaaaacgtgatgaaagaagaaaaaaagccaaccagttaagatccaagaaacga
gaagatattctggccaaaaagagggccatagggggaagtgattcagccccttttctgtct
gcaattataccaataggagaatctgccaatttgcaaaaattgttgaaacaaatgaaagag
tgtgatgctgatgccaaagtggagattacaggctgcaacataatgcacataaatatacca
cgttttaggcaaaacttcagtttgataatcccccaacctggagatctttatgctgcatta
gatgcttgtaaagtagttgatagtgttatattccttgtatcacctccatctgacagtgac
agctgtgtgtcacattcaacaaataatgaaggagtgctagggtttgacagtagtggcgaa
gaattactgtcagccatcatggcgcaagggcttccatctccaatttttgttgttaacgac
atcgatgcgatttctgcgaagaaacgtaatgactataaaaaacttcttctaaaacagcta
gatcagatggttcctgtagagaagcttcaggtaattgaaaatgaaagtgacgcactgagg
ctgtttcatcaaatagggtcgcaaaaacaacgaccagtttaccaaagaaacatgagatgc
cattttctttgtgaagaagtaaatttcaaacaaagtctggatgatccaacggttggtacg
ttaattgttgatggatatgtgcgatatcaacctttaaatgtaaatggcctagttcatata
ccgggatggggggattttcaaatggaacgaatcgaagtccaaagaaatccaggagaattt
atattcctcgaagaggctaatccctctctccaggaaacgctgaaatcagaaaacgatcct
gatcccatgaatggcgagcagacttggccctatcaagaagaaatggatggccaaactttg
gaagatggcaagatagaagataacgaagaaatggaaattaagaagcgattcccaaagggt
acatcggaatatcaagcggcatggatcaaagatgatgataatgatgccaaccaagaagat
gaaaaagaagaagacgacagtgacgattgggaagacgattgtgaagacgattgtgaagat
atgattgaagatgatgataatgaaagcggaacttcatcggaagaagatgaagaagacgaa
atggagtccgtggaaatggaaggcggagatactcatgtctatgacaagaaagttaatttc
gctgatgaagaaaacgatctaaaaagaattaaagaagcccgagaggatgagctttttccc
gatgaagttgatacaccacgtgacactttggccaaagtacgctttcagaaatatcgtggc
ctgaaatccttccgtacgtcgccttgggatccgaaagaaaatttacctatggactattct
agaactttccaatttcaaaattttcagcgtactcgaaagcgagtcttgaaagaagagcgg
actggagctaagcctggatggtacgtaagagttcatgtcaagaatgtaccgagccattta
ccagcgggtcttcaacctggctatccattggcactagttggcatgttacctcatgaacag
aaaatgagtgtgattaatctcgttttaaagaggttcaaaaatactcgggatcaacaggcg
attccctcgaaagaaaggttgatctttcattgcggatatcgtcggtatgccgcatcccct
atttttagtcaacacactgcagccaataagcataaatacgagaggttctttcgaccggaa
tcggtagtagtggcaactctttatgctccaattatgtttccgcctgcgtctgtcctagta
tttcgagaaaagaaggatggaagccaaattatgaccgcgactggatcagttttatctgtt
aatcctgaccgtattacagttaaacgagctgtcttgagcggagcaccttttaaagtacac
cgcaaatcggccgtcctccgttttatgttctttaaccgcgaagacattgaatggtttaag
ccagttgaactaaggacgaaatatggtcgacgaggtcatatcagagaaccacttggaaca
cacggccacatgaaatgtgtatttgacggccagatcaaatcacaggatacaataatgatg
aacctttacaagcgtgtgtttccgaaatggagctacgatcccaatgttgcatttccgcct
gctttatacaaccatgaagcagaaatggaggacgccgctaaccagttgatgtcataa
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