KEGG   Daphnia magna (water flea): 116919153
Entry
116919153         CDS       T07514                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116919153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmk03041]
    116919153
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116919153
Spliceosome [BR:dmk03041]
 Complex B
  Other components
   Prp19 complex
    116919153
 Complex C
   Prp19-CDC5 complex
    116919153
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    116919153
SSDB
Motif
Pfam: BCAS2 Csm1_N
Other DBs
NCBI-GeneID: 116919153
NCBI-ProteinID: XP_032780953
LinkDB
Position
LG3:complement(1369696..1370773)
AA seq 215 aa
MPIPSTNNFTPSERILVDDLPYVDQEYGDPVLREAALALVDEETRRYRPTKNYLEHLPPL
ELSSFETPLMKTEFERLSQKKPMDVLSMKRYELPPPSAGRLNDLQAWIECVDNSMAQLEH
QTTRILNLELMSEYGCESWRIYNTVLSQMISQSQKQLQELKKQIQDVNWARKKDQTEVGD
KIKHLEATWFGLITKNYEIELACAEIERQLASLNE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgccgattccgtcaacaaacaatttcacgccgagtgaaagaattttggttgacgattta
ccctatgtagaccaagaatatggagatccggttcttcgagaagcggcactggcgttggtt
gatgaagagacccgcagatataggccaactaaaaattacctagaacatcttcctcctctt
gagctttcgtcttttgaaactcctcttatgaaaactgaatttgagcgcctttctcaaaag
aaacctatggatgttttaagtatgaagcgctatgaacttcctccaccttctgctggtcgc
ctcaacgatcttcaagcgtggatagaatgtgtggataattctatggcccagcttgagcat
cagacaactaggattttaaacctggaattgatgtcagaatatggctgtgaatcatggaga
atctacaacactgttttatcccagatgatttcccaatctcagaagcaacttcaggagtta
aaaaaacagattcaggatgtcaattgggctagaaagaaggatcagacagaggttggggac
aaaattaaacatttggaagccacttggttcggtttgatcactaaaaactacgaaatcgaa
cttgcgtgtgctgaaattgagagacagttagcttcacttaatgaataa

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