Daphnia magna (water flea): 116919178
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Entry
116919178 CDS
T07514
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116919178
04131 Membrane trafficking [BR:
dmk04131
]
116919178
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116919178
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116919178
Autophagy
Mitophagy
Other mitophagy associated proteins
116919178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
116919178
NCBI-ProteinID:
XP_045027417
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Position
LG3:400123..404818
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AA seq
1005 aa
AA seq
DB search
MDTSNRTDDMDLELNFPSDLGELFPHEDSELIDLAGEDLFSSFGPVSPLGDNFHLLKPAI
IQPTVAPQKTIIPIPVVEPKPIQQRLLQTVPVAKIVPAISPQAVSKATPVPAKTTPQHIQ
PAQPVLVNKANQQSSVGTPIRVDSSSLGVLILGNTFGYNSVVTVQPNGGLVNVNSSVLGS
TNMFNGNSNPPSPSDRPPVIKKSSHNAIERRYRNSINDKILELKNLIAGEEAKMSKSAIL
RKALEYVRYLQQMNQKLIKENMALKMASQKQTVNGLLTASMDSPPSDITPPGSLENSTLA
ESPPSSFGSGSPLTYAASSDDEFAIDGSMVSPGNVIARSMLDRSRIALCMMMLAVFAFNP
FGNLLSHADSAVSHYTKPSGRVILEADPLDIVEDSGWYISVAAVSINIFVFLIVLLRTLV
HGEPCIERQSKSASLYWRQRKQADYDMNNGNYVTAATHYRQALCALGRTVPVSKVDVVAS
VGWNCWRQLLHRFGFARFLSGRVGKLFPNRDERRVAREFLAEAALCFHKLHQLHLSQQDV
IDPNSHYWFERYRGLALALSATNLGEAAGPALSAMSKADIYIHLALRTKHSFSGRGFLCA
RFYLARARQICQALNGNAPPRLQWLCSPAGYRFFLSHHWEYDDCPSTLFTSLSNKSDPLA
FTMQVYRQHVLQKALLTLVSPGQRVGDACDVEPSRRAQTGDALSYSQQLMENATAAVSPS
NDSSLLPPSTIQGLGVGDEVAGWWAAIVAVASYWLLCEEDKAEQLHARVEAYPKLTQGDP
LLDAVLGAYRARRLLLRGADPASIIQQCSLAGCRLKESLQVSLHKSPQLMVQAAQLLVSD
WLLETRTALWEKDFERNNMDVNYVAGPTVLLGFQEDLSSLKKLVQHLPSTLSRVFLHEAT
LRMMAGAAPDRTQQLLDRTLRYRQNKQSVICGSKGKNAFLDAGEREHATALYMACRHLPA
PLLSSPGERAGMLIEAARTLERIGDKKRLQDCYSLMKAIGTSIST
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtcaaatcgtaccgacgatatggatttggaactcaactttccttccgattta
ggagagttgtttcctcacgaggattctgaacttatagacttggcaggtgaagatttgttt
tcatcctttggtcctgtttccccactgggtgacaactttcacctcctgaaacctgccatt
atccaacctactgtcgcaccccaaaaaactatcattccaattcctgttgtggaaccaaaa
ccaattcaacaaaggttgcttcagaccgttccagtggccaaaatagttccagcaatttca
ccacaagctgtgtccaaggcaacccctgtcccggcaaaaactacaccacaacatattcaa
ccggcacagcctgtactggtgaacaaagccaaccaacaaagcagtgtagggacccccatt
agagttgactcttcatccttgggtgttctgatattgggcaatacttttggctacaacagt
gtggtcaccgttcaacctaatggagggcttgtcaatgttaactcttctgttttgggatct
acaaacatgttcaatggaaattccaaccctccaagcccatctgacaggcctcctgttatc
aagaaaagttcacacaatgccattgaaaggagatatcgaaacagcatcaatgacaagatt
cttgaactgaaaaatctcatagcaggagaagaagcaaagatgagcaaatcggccatcttg
aggaaggccctggaatatgttcgttaccttcaacaaatgaaccaaaaactaatcaaggag
aatatggcgttaaagatggcttcgcaaaagcaaactgtcaatgggttattgacagcctca
atggatagtcctccgtcggatattacacctccgggatcactggaaaattcaacgttggcc
gaatcgccacctagcagctttggtagcggatctcctcttacctacgcggcctcgtctgat
gatgagtttgccatcgatggaagcatggtgtcacctggcaacgttattgctcgatcaatg
ctggatcgttcgcgcattgctctctgtatgatgatgttggccgtattcgcattcaaccca
ttcggcaacctcttatcgcacgccgactcggccgtttcccattacactaaaccgtctggc
cgtgtcattcttgaagctgatcctctcgatattgtagaagattccggctggtacatctct
gttgcagctgtgagcatcaacatttttgttttcttaattgtccttctccgtactctggtt
catggagagccgtgcatagagcggcagagtaaatcagcatcgctctactggagacagagg
aaacaagccgattacgacatgaacaacggaaactacgtaactgcagctactcactaccgt
caagcgctttgcgccttaggtcgaacagttcccgtgtctaaagtcgatgttgtggctagt
gtcggatggaattgctggcgccagctgctgcatcgcttcggatttgctcgttttctcagc
ggccgtgttggcaaacttttcccgaatcgcgacgaacgccgagtagcccgtgaatttcta
gcggaagcggctctttgttttcacaaacttcaccagctgcatcttagtcagcaggacgtt
attgatcccaacagccactactggttcgagcgctatcgaggtttggctttggcgctgtcg
gctacaaatctcggcgaagctgctggtcccgctctgagtgccatgtccaaagccgatatt
tacattcatctggcactacgcaccaaacactcgtttagtgggcgaggctttctgtgtgct
cgcttctacttagcacgcgcccgtcaaatctgccaggctctcaacggcaacgcccctcct
cgtcttcagtggctgtgcagcccggccggttatcgtttcttccttagtcaccactgggag
tatgacgattgtccctcaactttgttcacatcactgagcaacaagtcggatcctttggcc
tttaccatgcaggtctatcgtcagcacgtcctacaaaaagcgctgctgactctagtttcg
cccggtcaacgtgtcggtgacgcttgcgatgtggaaccttcacgtcgggcgcaaaccggc
gatgcgttgagctactcccaacagctgatggagaatgcaacagccgcagtctcgcccagt
aatgactcgtcgcttttgccgccttccactattcaaggtctgggtgtcggtgacgaggta
gccggatggtgggctgccatagtggctgtagcctcttattggctcctgtgcgaagaggac
aaggcagagcaattgcacgctcgcgtagaagcttatcctaaactgacgcaaggagaccca
ctactggatgccgttttgggtgcctacagggctcggcggttgttgctacgcggcgctgat
cccgcatccattattcagcaatgctctctggctggctgtcgtctgaaagagtctctccaa
gtttcgcttcacaagagcccacaactaatggttcaggctgctcaactactcgtcagcgat
tggctgttggagactcgcacagcgctatgggaaaaagattttgaaaggaacaacatggac
gtcaattacgtagcaggacctactgtcttattaggattccaagaagatttgtctagtttg
aaaaaactagttcaacatttgcccagtactctttcgagagtattcttgcatgaagcaacg
ttgaggatgatggctggtgcggcgcctgatcgaacacaacagttactggatcgtacgctt
cgctatcggcagaacaaacagtctgtcatttgcggcagcaaaggtaaaaatgcgttcttg
gatgccggcgaacgagaacacgcaacagcgctgtatatggcctgtcgccatttacctgct
ccgttactctcatcgccaggcgagagagctggcatgttgattgaagcggcacgaacgttg
gaacgcattggcgataagaagcggttacaggattgttatagcttaatgaaagcaatcggt
acatccatttcgacttga
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