Daphnia magna (water flea): 116919246
Help
Entry
116919246 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116919246 isoform X1
KO
K24478
ankyrin repeat and fibronectin type-III domain-containing protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dmk04990
]
116919246
Domain-containing proteins not elsewhere classified [BR:
dmk04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116919246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
RA
Ank_3
Ank
fn3
RA_2
Ank_5
Motif
Other DBs
NCBI-GeneID:
116919246
NCBI-ProteinID:
XP_045027296
LinkDB
All DBs
Position
LG3:complement(3372001..3400420)
Genome browser
AA seq
1491 aa
AA seq
DB search
MSMASGGGAEKRHQLSIDRAVFLILRVRRVFRRRLTGKRLRSSGQQSTHGSNVNDKGGVG
GGLHSMSPSQRPAPFLRSRTLPSIIVPATAVVAMATASAAVGAMAAAAVDNGLTVPPSGN
RSQSSSDSSPNEWQDIRDLLSLSSITGSKPLGSGSSDPGTPSSSVGGVRNKRSSADNSSP
GNSNRLPKLFLNSSQGTAADGVKSNQQLQPPGNVMKTSPVQIQLQLLAGNNNDIHQPTTR
PRRHSLESNDSLRGKALGTDNQQAPDVLPTTSGATTAGTRVNLAVPELQGKGFPTSPSVS
GKRKTSHDRKKDSSLELLVHGLHLTKTDLKKMEKLTKINIHLHALFAAVEFGQVEKARAI
LEDNEVDINSYNSDGLSLMDVAVLTNNTEMVKLLIQQGAREGTEYGSKESLNLHLAQLLN
EAEKQLEEKSQPSSSSPVRIDLDKHIALWKRRVRILRKMKSGLEQLKVPNSPNQARVEVV
GEHSVHIWWLQPEADSGGICTKFKVQWSTHPDFAFPGGELEVRDTQIWKRGGVGDEFNEV
NVTVSTCPSNSRCYFRVAAGNLSGYGSFKTTLPSSVLLSVWRIIDGRKPRFAGRLPILDD
LFSKVRTWRPDYASEIRQLEDGLGEAPMKQRKNPAKINLRQFFGANVKFQKHLRRGVYFA
CIVFHEDKVLVTTEEFPPVVEVDDTYPASVNNDFHWLMKIGCTWSDVKTLRQDMERSSSS
ANAHFRIKILQAAAQLQSALGLQDLGQLHYQPLKDSQGTMVISSTCHLANIKAVPSSLNF
KWLPLSKLQRRVVTNEESTASDLLLASLQEQINFMQVSNKPLPRGLYLGYLKMKSSVDLI
RVLVPKDAPNLLPHAKIRDNPWVSSEEWQWIKKLAKNQPQNKNGSAEMNDGGDEGGDDKT
DYSVMDGLTGKLNLQPSTAQLLFQSQLQRAACKLLGSMGIEGSVMQHRIYEDEVIELSPD
VSVILLLPPPDSVCAVAGQSEALFHRPEFLSVPLQVFEMIHLRTYQRDLIGRYSRLSSIL
ELDSNLAQLAMREAFSSVELAEAKQRFQRLQDVQVQVDSTWRGSRWIMDVLSLARDRTMT
GVGVAIAALSQQIPPTIPVLSTPTEPAEESARRPALTLKTSNSSTRTNHSIAANNDGRIM
GGIPGGKHRVLVKTKSDNKLLGNRNSMGDSPAFIRINTVRSRTPVCPECSVPLDLPGYVS
NCGSCSCSRARYTQPETGELFKQQHSRSNETLPTPPILIAQNGARKCISRSENQLNNLEF
QPFLDAEGTDDSTAVYAAAGQEDQEQQPEPKCEESCDEPPAPPPTKLQRGGSGGKKGRST
GSMRSNSQESECSHPSRSSHTPSLTSLSSVDGDPDSGSIRSGDVESGEASASGIIQVYAA
YESGLANGTSVKLHVTTRTVAREVVDLVVRQLNMAVGLKGKGGPVYAADEFKNFCLVAVI
GARERCLRDDFRPLHLQNPWKKGRLYVRQKKDVLAAIEQSGRQQKPQPAAL
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggcgagtggtggcggtgctgaaaagaggcatcagttgtccatcgaccgggcc
gtctttctcatcttgcgcgtccgtcgagttttccgacgcagattaacgggcaaaagactt
cgttctagcggtcagcaatcgacccacggcagcaatgtcaacgacaagggcggtgttggt
ggagggctccattcgatgtctccgtcacaacgcccagcaccttttctgcgatccaggaca
ctgccgagcatcatcgttccagcgacagcagttgtggctatggccacggcttcggcagct
gtgggagccatggcagcggcagcagtggataacggactcacggtcccgccgtccggcaat
cgttcgcaatcttcgtctgattcatcgcctaatgaatggcaagacatccgtgatttgttg
agtttatcttccatcactggatcgaaaccactaggatctggatcttctgatcccgggacg
cctagttcctctgtgggcggagttcgaaacaaaagatcctcggctgacaacagttcacca
ggcaacagtaaccgacttccgaaattgtttctaaacagcagtcaaggaacggcggctgat
ggtgtgaaaagcaatcaacaacttcaaccgcctggcaacgtgatgaagacgagtccagtt
caaattcaattgcagctgttggctggcaacaacaatgacatccatcagccaacgacgaga
cctcgacgtcacagtttggaaagtaatgactccttacgtggcaaagcattgggcacggat
aatcaacaagcacctgatgttcttcctacgacatcaggtgcaacaacagccggaactcga
gtcaatttagctgttccggaattgcaaggcaaaggttttccgacttcaccgtctgttagc
ggaaaacgtaaaacatcacacgataggaagaaagattcatcactggagttgctcgtccat
ggccttcacttgaccaaaacagacctgaaaaaaatggagaaactgacgaaaatcaatatt
catttacatgcactgtttgccgccgtcgagtttggccaggtggaaaaggccagggcgatc
ctcgaggacaatgaggtcgacattaacagttacaacagtgacggcctgtccttgatggat
gtggccgttttgacgaacaataccgaaatggtcaaattactcatccagcaaggagccaga
gaaggaacagagtatggcagtaaagaatcgctgaatttgcatcttgctcagctcctcaac
gaagctgagaaacagttagaagagaaaagccagccatcgtcgtccagtccggtccgaatt
gatttagacaaacacatcgccctttggaagcgacgagtgcgcattctgcgcaaaatgaaa
tctggacttgaacagctgaaggtgcccaacagtccgaaccaggcccgcgttgaagttgtt
ggggaacattccgtccacatttggtggctccaacctgaagcagattctggtggcatttgc
acaaaatttaaagttcaatggtcaactcatccggattttgccttccctggtggcgagctg
gaggtgcgcgatacacagatctggaagcgaggcggagtaggcgatgaatttaacgaggtg
aacgtgaccgtctctacttgtccatccaattcgcggtgttattttcgagtagccgccggc
aatctatccggatacgggtcgttcaaaaccactctgccatcgtctgtcttgttatcagtc
tggcggataatagacgggcgaaaaccgcgtttcgccggccgtttacctatattggacgac
ctatttagtaaagtgcggacatggcggcctgattacgcttctgaaattcgacagctggaa
gacggcttaggtgaggcgcccatgaaacaaaggaagaatccggctaaaatcaacctaagg
cagttctttggtgccaacgtcaagtttcaaaagcatctgcgcaggggagtttattttgcg
tgcatcgtcttccatgaagacaaggtcttggtgaccaccgaggaatttccacctgtcgtt
gaagttgacgatacttacccggcgtcagttaataatgatttccactggctcatgaagatt
ggttgcacttggagtgacgtgaaaactctccgacaagatatggagcgcagctcgagttca
gcaaacgctcatttccgtattaaaatattgcaagcagctgctcagttacaaagcgccttg
ggcctgcaagatttaggtcagcttcactatcaaccgttaaaagacagccaagggaccatg
gtgatatcgagtacctgccatttggccaatattaaagctgttccgtcttcattgaatttc
aagtggctcccgctctccaaattgcagcggcgggtggtgacgaacgaagagagtacggcc
agtgatctcctgctcgcttcgctacaggaacaaatcaacttcatgcaagtcagtaacaaa
cctctaccgcgaggactctatttgggctacttgaaaatgaagagctccgttgatctaatt
cgcgtcctggtgcccaaggacgcgcctaatttattgccacatgcgaagataagagacaat
ccgtgggtgtcgagtgaagaatggcagtggatcaagaagttggctaaaaaccagcctcaa
aacaaaaatggtagcgcagagatgaatgacggtggtgatgaaggtggtgatgacaagacg
gattactcagtaatggatggcctgacgggaaaacttaacctacaacccagcacggcccag
ctgctctttcagagtcaattacagagggccgcgtgcaaattattgggaagcatgggtatc
gaaggatctgtcatgcagcaccgcatttacgaagatgaagtaattgaactcagtccagac
gtttcagtgattctgttgcttccgccaccggacagcgtttgcgccgttgccggtcagagt
gaggcactctttcatcggccggaattcctctccgttcctcttcaggtctttgaaatgatt
catctacgcacataccagcgtgatctcattggccgctattcacggcttagttcaattttg
gaactcgattcgaatttggcccagttggccatgcgtgaggctttttcaagcgtggagtta
gcggaagccaagcagcgcttccaacgacttcaggatgttcaagtacaggtggattcaaca
tggagaggatcacgctggatcatggacgtcctatcgctggctagggatcgaaccatgact
ggagtaggagttgctattgcagctctgtctcagcaaattcctcctactattcctgtgtta
tctactccgactgagccagcggaagagtccgctagaagaccggcactcaccttgaagacg
agcaattcttctacaagaactaatcattcgatagcggcgaataatgacggtcggattatg
ggcggcatacctggcggtaaacaccgagtccttgtcaaaacgaagagcgacaacaaactg
cttggtaatcgcaattccatgggtgattcaccagccttcattcgtatcaacacagtccga
tctcggacccccgtctgccctgaatgttccgtcccactggatttgcccggctacgtttcc
aattgcggttcatgctcttgttcgagagcccgctacactcaaccagaaactggtgaactt
tttaagcaacagcatagccgtagcaacgaaactctaccgactccacctattctcatcgcc
caaaatggagctcgcaaatgcatatcaaggagtgaaaatcagttgaacaatcttgaattc
cagcctttcttggacgctgaaggaacggatgacagcacagctgtgtacgcagcagccggc
caggaagatcaagagcaacagccagagccaaagtgtgaagaatcatgcgacgaaccccca
gcgccaccaccgacaaaactgcaacgaggtggatcaggtggaaagaaaggtcgttcaacc
ggcagtatgagatccaacagtcaggaaagcgagtgcagtcatccgtcaagatcgagtcat
accccttcgctgacgtcgctgtcatcggttgatggtgatcctgattccggaagtatacgc
tcgggtgatgtcgaaagcggggaagcctctgctagtggaattattcaagtttatgctgcc
tatgaatccggtttagccaatggcacaagtgtgaaattacatgttactactagaaccgtc
gctcgcgaggtagtggatttagtggtgcgccaactaaacatggctgttggtttgaaagga
aaaggtggtcctgtctacgcagcggatgagtttaaaaacttttgcttagtagccgtcata
ggagcaagagaacgatgcttgcgtgacgatttccggccacttcatctccaaaatccgtgg
aaaaagggacgtctttacgtcagacagaaaaaagatgtccttgcagccatcgaacaaagt
gggcgccagcaaaagcctcaaccggctgccctctga
DBGET
integrated database retrieval system
