Daphnia magna (water flea): 116919374
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Entry
116919374 CDS
T07514
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116919374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116919374
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
116919374
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
116919374
NCBI-ProteinID:
XP_032781231
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All DBs
Position
LG6:5608692..5613397
Genome browser
AA seq
1077 aa
AA seq
DB search
MGLSEDADQENTEERFRGLCADLNIDKNTADEAWRNYETISTNYTLEGDHIHWLCCALYV
ACRNSTVPTVGQVGTVEGNCVSLTQLRRKCNISMLDFFDKSRKWADMANLSEELRRKFVS
LERNFEVCSVIFKKYDEMFKEIFQDPANDPPRQPRSRKSRKLPCTSKDVYDFCWAFFVRV
KTNFSQIHEELVSCFHLLLACLDYIYGNSLVANRRDLFNPQFPGLPSDFNTRDYKAPTEP
GCIVECLYSRNSGQDEKTVVDVKRIKTHVLKPYVKSLIDKEVLKGDKRTLCGILDTAVFD
LNKKVVNNDYEDYVHRVGDFDERIFSSPDALTEIGTPVKATFNSIASFEEQKLMVYPARR
NLQSQFDGSHHLALATPLTGRNFLKAKEPGSVTPVSTATQSVSKLQALVSGRQTGPSEEL
RRIFSECSNNPGESIQARVKEMGEKFCNHYVNHADEGRTNGFSMDMARKRLQLGESLYYK
VLENIINDERRRLKPGTDLSGILQQDMLHQLLITCCLEIVLFSYNSQRTFPWILEVFPIQ
PFYFYKVIEVLIRAEDLSRDVVKHLNHMEEQILESMAWRSQSPLWEYLKSCDQPIPSCEE
VSLPSQLQPATPSAAQTPSAAQSSDPVRNTPQQPIPYSPSTYVTNKRAESSLAASLLQSP
VSSVASVNERTPAQSSRRKLFSGSETIQSSPSTTVAAAAGSVVNAIKALSESEANERKPE
LVPSPGVLVATDNKPKRTGSLSLFFRKFYHLASVRLQDLCNRLELYEEDLRKKIWTCFEY
SVMKHSDLMQDRHLDQILMCAVYVICKVTTRDKNFTDIMRCYRTQPHASSHVYRSVLLCT
RARRGSASSTSGSASSVTGGNNPSATPSPSPSEEEDESTASSTVKANTDEKKTEANGEKA
LPPVRSSSTLPFPQPSSCPPTPTGLAGTSSSFEYEDRGDLILFYNTVYVRRLQAFALKFS
NRNRLEALPLSPLPLQRHVTLSPRRKVSAKHTIFISPLKANGIPHSPLPMRYSFNRSPSK
DLQAINAFLREERPTKRLLSYEIGPRDHITDAAMAPPPPKFPMTVENAGAARKISFH
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtctgaagatgccgaccaagaaaatacagaagagaggtttcgtggcctctgt
gccgatctcaatatcgacaaaaacacagccgatgaagcctggcgaaactacgaaaccatt
tcaactaattacactctagagggggatcatatacattggctatgctgtgccttgtatgtg
gcctgcagaaacagcactgtcccgacagtgggacaagttggaactgtggagggcaactgt
gttagtttaacccagcttagaagaaaatgcaatatcagcatgcttgatttctttgataaa
tcaagaaaatgggcagacatggcaaatttgtctgaagaactacgtcgcaagtttgtaagc
ttggaacgtaattttgaagtctgctctgtaattttcaaaaaatatgatgaaatgttcaaa
gaaatctttcaagacccagcgaatgatccaccaaggcaacctcgttctagaaagtcacgc
aaacttccgtgcactagcaaagatgtttatgacttttgctgggctttctttgtacgagtc
aaaacgaatttttcacaaatccacgaagagctagtcagctgttttcatttgctgctagcg
tgccttgattacatttatggcaattctcttgttgccaatcgccgagacctcttcaaccct
cagtttcctggtctaccaagcgacttcaacactcgcgattacaaagctcctaccgaacct
ggctgtatcgtcgagtgcttgtactctcgaaatagcggtcaggacgaaaaaactgtcgtt
gacgtcaagcgaatcaaaacacatgtcctcaaaccttacgttaaaagcctcatcgataaa
gaggtgctcaaaggggacaagagaaccttgtgtggtattctcgatacggctgtcttcgat
ttaaacaagaaagtggtcaacaatgactatgaggattatgtgcatcgggtcggcgatttc
gatgaacgcattttctccagtcctgatgccctaacggagatcggaaccccggtgaaggcc
actttcaacagtatcgcttccttcgaggaacagaaacttatggtttatccagctcgtcgc
aatttgcaatcgcaatttgatggttcacatcatctggcattggccacacccttgactggc
cgcaatttcctcaaagccaaagaacctggatcggtaacacctgtgtcgacggccactcaa
agcgtcagtaagctgcaggctctggtctcaggtcgtcaaacgggtcctagtgaagagctt
agacgcatattcagtgagtgttctaacaatccaggagaaagcatccaggcccgcgttaaa
gaaatgggcgagaaattctgcaaccactatgttaaccacgccgacgaaggtcgtaccaat
ggttttagcatggatatggctcgcaaacgtctgcaattaggagaaagtctttactataaa
gttttggaaaacattattaatgacgaacgaaggcgtctcaagccaggcactgatctatca
ggaattctccagcaggatatgcttcaccagctgttgatcacgtgctgtctagagattgtt
ctcttctcctacaactcacagcgcacattcccgtggatattggaagtcttccctattcaa
cctttctacttttataaggtcattgaagtactgattcgggctgaggatttatcccgtgac
gtagtaaaacacctaaaccatatggaggagcaaattctcgagtctatggcatggcgttcc
caaagtccgctgtgggaatatttgaagagctgcgatcagccaattccctcttgcgaagag
gtatcgctgccaagccaacttcaaccagccacgccctcggctgctcagacgccgtccgcc
gcccagtcatcagatccagtcagaaacactccgcaacagcctattccttattcgccatcg
acctacgtcaccaataagagagcggaatctagtcttgctgcttctcttctgcaatcaccc
gtttcatcagtggcctcagtaaatgaacgtactccagcccaatcttcgaggcggaagttg
ttttctggttctgaaacaattcaatcaagtccttctaccacggtggctgctgctgctggt
tcagttgtcaatgcaataaaggctctctctgaatcggaagccaacgaacgtaaacctgag
cttgtccccagtcccggtgtgctagtagctacagacaacaaacctaagagaacgggatcc
ttgagtctattttttagaaagttttatcacttggcatccgttcgactacaagacttgtgc
aatcgtttggagttgtatgaagaagacttacgaaagaaaatatggacatgtttcgagtat
tcggtgatgaagcacagcgatttaatgcaggatcgccatcttgatcaaattttgatgtgt
gctgtctacgtgatatgcaaagttactactagagacaagaactttaccgacatcatgcgt
tgctatcgaacacaacctcacgcttccagtcacgtatatcgcagtgttttgctctgcacc
agagcccggcgtggatcggcgtcatcgacttcaggatcagcgtcatccgtaacaggaggg
aacaatccatcagcaactcctagtccttctccgagtgaagaggaggacgagtcaacagca
tcgtccactgtcaaggctaataccgatgaaaagaaaacggaagccaatggagaaaaggcg
cttccaccagttcgctcttcgtcgacgttgccgttcccacagccatcgtcttgtcctccc
actccgacaggattagctggcacttcgtccagtttcgagtatgaggatcgaggagatctg
attctgttttacaacacagtctatgttcgccgacttcaggcgttcgctctcaaattctca
aatcggaatcgcctggaagcattaccactgtcacctctgcctttacagcgtcatgtgacg
ctctctcctcgacgcaaagtgtcggcgaaacatacaattttcatcagtccactgaaagcg
aatggtatccctcattccccgcttccgatgcgctatagctttaaccgtagcccgtcgaaa
gatcttcaggctatcaatgcctttttacgcgaggaacgcccgacaaaacgtctgctctcg
tacgaaattggtcctcgagaccacattaccgatgctgctatggctcctcctccgcccaaa
ttccctatgacagttgaaaacgccggtgcggcacgaaagatctctttccattga
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