Daphnia magna (water flea): 116919396
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Entry
116919396 CDS
T07514
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116919396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116919396
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116919396
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
116919396
NCBI-ProteinID:
XP_032781257
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All DBs
Position
LG3:8862278..8863697
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AA seq
299 aa
AA seq
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MATALANSNLQSVDREKIYLWITELTNPETRESALFELSKKREVVPDLAPMLWHSFGTIA
ALLQDIVSIYPAVSPPTLTAQQSNRVCNALALLQCVASHQETRSAFLQAHIPLFLYPFLH
TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMETGSELSKTVATF
ILQKILLDETGLAYICQTYERFSHVAMILGKMVLSLAKEQSARLLKHVVRCYLRLSDNPR
AREALRQCLPDQLRDNTFSTCLKDDKSTKQWMAQLLKNLETTNGMVDPRIAGLPSMTQP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctctggcaaactcaaacttgcaatctgttgaccgagaaaaaatttattta
tggattactgaattaacaaatcccgaaactcgtgaaagtgctcttttcgaattaagtaag
aaacgagaagttgttcctgatttagctcccatgctgtggcattcatttggaaccatagct
gctcttttgcaagatattgttagcatatatccagctgtaagtccacctacgcttacagct
caacagtcaaatcgggtatgcaatgcacttgcactcctacagtgtgtggcctcccatcaa
gaaacaagatctgcttttttgcaagctcacatccctctatttctctatccatttttgcat
actgtgagcaaaacaaggccatttgaatacctacgcttgactagtttaggagtcattggt
gctctagtgaaaactgatgaacaggaagttataaactttcttctaacaacagagataatt
ccattgtgtttgcgaataatggaaactggatctgaattgtctaagacagttgccacattc
attctccagaaaattctcttggatgaaacagggctggcctacatttgtcaaacctatgaa
cgtttttctcatgttgctatgatccttggtaaaatggttttatctttggccaaagagcag
tcagctcgtcttttaaagcatgtggttcggtgttacctccgtctttctgataatccgaga
gctcgagaagcactgcgacagtgtctgcctgatcagctacgggacaacacgttctcaacc
tgtctgaaagatgacaaatcgactaaacagtggatggcacaactgctaaaaaatctggaa
actactaacgggatggtagatcctcgaattgccggtttgccctccatgactcaaccataa
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