Daphnia magna (water flea): 116919604
Help
Entry
116919604 CDS
T07514
Name
(RefSeq) AP-3 complex subunit beta-1
KO
K12397
AP-3 complex subunit beta
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116919604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116919604
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Others
AP-3 complex
116919604
Endosome - Golgi transport
116919604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
116919604
NCBI-ProteinID:
XP_032781509
LinkDB
All DBs
Position
LG3:5873694..5878611
Genome browser
AA seq
1071 aa
AA seq
DB search
MASGNLGLTYGGQEKTPSLSGETEFAAEAGAPGGLFHADYKRHDDLKQMLDSSKDSLKLE
AMKRIIGMVAKGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQ
RALKDPNQLIRASALRVLSSIRVPVIVPIMMLAIRDSVSDMSPYVRKTAAHAIPKLYDLD
PEQKDELVMVIERLLSDQTTLVVGSAVMAFEQVCPERTDLIHKNFRKLCAVLVDVEEWGQ
VIIIGMLTRYARTQFTDPNINGTSHSQKDKPFYEDSEEDDEKSKQRESLALDSDHRLLLR
NTKPLLQSRNSSVVMAVAQLYHHLAPKEDVAVVTRALIRLLRSHREVQTVVLNSIASMSV
NRKDMFEPFLKNFFVRNTDATQIKLLKLEILTNLANESNITFILREFQTYISSQDRDLVA
ATIQAIGRCAAGIKEVTDTCLSGLIALLSNSDELVVAESVVVIKKLLQTQQGSHGDIVGQ
MARLVNRITVPQARAAILWLVGEHCEKKRVSKMAPDVLRFMARSFSNEQDVVKLQILNLA
AKLCLSNPKQTKVLCQYVFSLAKYDQNYDIRDRVRFLRHLIFPSTEQAVLAKYAKKIFLA
SKPPPVIESVFKDRDEFQLGSLSHYLNSRVVGYMDLPSFPAVAPDSSVRNVESPRPTIPV
ASVPGNSAGTSSKGKKMEAFYSESSSEDEERNEESGSSDSKSDSSSETESGSAASDSDAS
TSDEEDDDDSINISQQNIVRLSPSLSPSPPSHRLTRSLVIQSSSESQYSSNSSDSDSSIS
DTPEKVSPRMPLAVPKSNLDLLLDLDVSESVTTPVMASIPGIPFASLATTPNSDSSIQPA
SAVYISTRPMELVSSVSSGCSLQILYRYSRSVNLYSASMVTIELTLVNTGNEDLAEIKIA
NKNMPVGISMHEFTTLASLPAGATRLVTLGIDFGDSTQTVSCDLVASGRPIRINFRPSVG
ELIRPVTCSEGVFINEQGKLKGMNEHSFPITNMSELGDVKNISAKLFRASNMASISSSEQ
NTLRFAGQTLSSKSLVLVTIMIGANPKLTVCCEKMIIGSMLLAELKEALKN
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggtaacttaggactaacttatggaggacaagaaaaaacaccatcattgtca
ggtgaaactgagtttgcggcagaagctggagctcctggtggattattccacgccgattat
aaacgtcatgatgatttgaaacaaatgttagacagcagcaaagacagcctcaagttagag
gcaatgaaaagaataattgggatggtagcaaaaggaagagatgcatcagatttgttccct
gctgttgtgaagaatgtagtatcaaaaaatattgaagtaaagaaattggtgtatgtttac
ctggtacgatatgctgaagaacaacaggacttggcactcctttcaatatccacatttcaa
cgtgctttaaaggatcctaatcagctgataagagcaagtgctcttcgagttctctctagc
attagagttccagtcattgtgcccattatgatgttggccatcagagactctgttagtgac
atgtcaccctatgtcaggaaaacagcagctcatgctataccaaaactctatgatcttgat
cctgagcaaaaagatgagctggttatggtaattgagagactgctctcagatcaaacaaca
cttgttgttggatcagcagttatggcctttgaacaggtttgccctgaacgcacggatctt
atacataagaacttcagaaaactttgtgctgttttggtggatgtcgaggaatggggacaa
gttattatcattggaatgctcacacgctacgcgcgcacgcaatttacagatcctaatatt
aacggtaccagccattctcaaaaggataaaccattttatgaagacagcgaagaagatgat
gaaaaatcgaagcaaagagaatccttggcattagattctgatcaccgattgctcctgcgg
aatacgaaacctttgcttcaaagcagaaattcttcggtcgttatggctgttgcccagctg
taccatcatttggctcccaaggaggacgtagctgtagtgaccagggctttaatacgatta
ctgcgttcacatcgcgaggttcagactgtcgtgttgaactcgattgcatctatgtcagtc
aacagaaaggatatgtttgaaccgtttctaaaaaatttctttgttcggaataccgatgcc
acgcaaatcaaactacttaaattggaaattttgacgaatttggcaaacgaatcaaacatt
actttcattctccgagagtttcagacttacatatccagtcaagaccgagatctagttgct
gctacaattcaagccatcggaagatgtgccgccgggattaaagaagtcactgatacatgc
ttaagcgggttgattgctttgctgtcaaactcagatgaactcgtggttgcagagagcgtc
gtggtcataaaaaaacttttgcaaacacaacaaggttcgcatggagacattgttggtcaa
atggcccgacttgttaatagaataacagtgccccaagccagggcagccattctgtggctc
gtaggcgagcattgtgaaaagaaacgggtgtccaaaatggctcccgatgtacttcgcttc
atggctcgtagtttttctaatgagcaagatgtagtgaaactacagattctaaatctagcc
gctaagctgtgcttgtcgaaccccaagcaaactaaagtgctatgccaatatgtctttagc
ctggcgaaatatgatcaaaattatgatatccgagatcgtgtacgctttttgcgtcatctc
attttcccgtcaacggaacaagcagttcttgctaaatatgcaaaaaaaatatttttggct
tcaaagccgccaccggtgatcgaatcggttttcaaagatcgagatgaattccagttgggc
tctctatctcactaccttaacagccgagtagttggatacatggacctaccgagctttccc
gctgttgctcctgattctagtgtacggaatgttgaatcaccacggccgaccattccagtt
gccagtgttcctggcaattctgcgggaacctcgtctaaagggaagaaaatggaagcgttt
tattctgaaagttcttcagaagacgaagagaggaacgaagaatctggaagctcagactca
aaatcagactcatcctctgaaactgaatcaggttctgcagccagtgattcagacgcatcc
acctctgatgaagaagatgacgatgattccattaacatttcacaacaaaatattgttcga
ctgtcaccatctctttctccgtcacctcccagccatcggctcactcgctcactcgtgatt
cagtctagttcggaatcgcagtattcttcgaacagttctgattcagactcgagcatctca
gacacacctgagaaagtatctccgcgaatgccactagctgttcctaaatcgaatttggat
ctgcttctcgacttagatgtgtcagaatctgtaaccactccggtgatggcttccattcca
ggaattccttttgcttccctagcgaccacaccaaattcagattcgagcattcagccagct
tctgcggtatacatttccacgagaccgatggaacttgtttccagcgtttcaagtggatgc
agtctacaaatactataccgctatagtcgctccgtcaatctttattcagcttccatggtc
acaatcgagcttactctggtaaacactggtaatgaagacttggcagaaatcaaaatagcc
aacaaaaacatgcccgttggcatttcaatgcatgaatttaccaccttggcatcacttccc
gctggagcaacaagacttgttaccttgggcatagatttcggcgattcgacccagactgtc
agctgtgatttagtggctagcgggcgacctatacggattaattttaggccttccgttggt
gaactaattcgccccgtaacatgtagtgaaggagttttcatcaatgaacaagggaaattg
aagggaatgaatgaacatagttttcccatcaccaacatgtccgaacttggagatgtaaaa
aatatctcagctaaactgtttcgcgcgtcaaatatggcttccataagttctagcgagcaa
aataccttaagattcgccggacagaccctgtcttccaaatcattggtattggttactatt
atgattggggccaatcctaaattgacagtttgctgtgagaagatgataattggctccatg
cttcttgcagaactcaaagaagcgctaaaaaattaa
DBGET
integrated database retrieval system