Daphnia magna (water flea): 116919780
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Entry
116919780 CDS
T07514
Name
(RefSeq) F-box only protein 11 isoform X2
KO
K10297
F-box protein 11
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116919780
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116919780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Polysacc_synt_C
F-box_5
Motif
Other DBs
NCBI-GeneID:
116919780
NCBI-ProteinID:
XP_032781699
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All DBs
Position
LG3:complement(4135394..4140804)
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AA seq
936 aa
AA seq
DB search
MPSPSLRSPLYSLRRSKRKGIKRGAAASNNSRVNSDGEEGAADGNLQNNASSANNENPVS
GSVAPQPVVPSAVGLVTGGASATGHQPPYDLRRKSPHHDPAAAAVAPNYPSGCNPSGSLS
SNSACAAGPSGYAACMLPARKRPRRTCFTTAENGNSVDEQRSAAHYLQYELPDEVLICIF
SYLFERDLCRVSQVCKRFQSIANDTELWKTLYQRVFEYDTPLFHTGICKYEFIAIEESEY
DNPWKESFKQLNHGVHVRLGFQEKVLKHPSRYNGRSIAYFDTIQSALEFLDDAENPLVFV
HKGSYQREYLVVENNVNILGCSSGNVAENVTIERDTESTVTFMEGARSSYLGYVTLKFSP
DISSSVPHHKHYCLEIGENCSPVIDHCIIRSSSVVGAAVCVTGSGAEPIIRRCDISDCEN
VGLYITDHAQGLYEDNEISRNALAGIWVKNHANPVMRRNHIHHGRDVGIFTFDNGLGYFE
SNNIHNNRIAGFEVKGANPTVVRCEIHHGQTGGIYVHESGQGQFIENRIHSNNFAGVWIT
SNSNPTIRRNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTNSDPIVRHNKIHH
GQHGGIYVHEKGQGLIEENEVYANTLAGVWITTGSTPVLRRNRIHSGKQVGVYFYDNGHG
RLEDNDIFNHLYSGVQIRTGSNPIIRRNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAG
VWIKTDSNPTLKRNKIYDGRDGGICIFNGGKGILEENDIFRNAQAGVLISTQSHPILRRN
RIFDGLAAGIEITNNATATLEFNQIFNNRFGGLCLASGVTPICKGNKIFNNQDAVEKAVN
GGQCLYKISSYTSFPMHDFYRCRTCNTTDRNAICVNCIKTCHAGHDVEFIRHDRFFCDCG
AGTLTNQCQLQGESTQDTDTLYDSAAPVESHTVMVN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtccctcgctgcgttcacccctatattctctgagaaggtcgaaacggaagggc
atcaagagaggtgctgctgctagtaataactcgcgcgtcaactctgatggggaagaaggg
gcagctgatggaaatctccaaaacaatgcatcgtcagccaacaatgagaatcctgtctca
gggtctgttgctcctcaacctgttgttccctctgccgttggtttagtcactggtggtgcc
tctgcaactggccaccaaccaccttatgatctgaggaggaagtcaccacaccatgatcct
gccgctgcagccgtagccccaaactacccatcaggctgtaatcccagtggcagcctttca
tctaattcagcttgtgcagctggccccagtggctatgcagcatgcatgcttcctgcaagg
aagaggcctagacgaacctgtttcacaacagcagagaatggcaactcagtagatgaacag
cgaagtgcagctcattacctccagtatgaattacctgatgaagttctcatatgcatattc
agttatctgtttgagagagatctgtgtcgcgtcagtcaagtctgtaagcgtttccagagc
atagctaacgacaccgagctttggaaaacgctataccagcgcgtttttgagtacgacaca
ccattatttcacactggcatatgcaaatacgagttcattgcgatagaagaatccgaatac
gataacccgtggaaagagagcttcaaacaactaaatcacggcgttcatgtcaggctggga
tttcaagaaaaggtccttaaacacccgtcacgctataatggtcgttcaatagcctatttc
gatacgattcagtcggcgctggaattccttgacgacgcggaaaatccattagtcttcgtg
cacaagggatcctaccagcgcgaatacctggtagtggagaacaacgttaatattctaggt
tgttcctcgggtaacgtggccgaaaacgtaaccatcgaacgagacacggagtcgacagtg
acgtttatggaaggtgcaaggtcttcctacctgggctacgtcacgctcaaattcagtcca
gatatctcatcatccgttccgcatcacaaacattactgccttgaaattggagagaattgc
tcacccgttatcgaccattgcatcatccgcagcagctccgtcgtaggggcagctgtttgt
gtaactggttctggtgcggaacctataatccgccgttgcgacatatccgactgcgagaat
gttggcctttatatcaccgaccacgctcaaggtctttatgaggacaacgaaatcagccgg
aacgcgcttgcgggtatctgggtgaagaatcacgccaatccagtcatgcgccgaaatcat
atccatcacggccgagacgttggcatcttcacctttgataatggactgggctattttgag
agtaacaatatccataataacaggattgctggcttcgaagtaaaaggagcaaatccgaca
gtggtgcgctgtgaaatccatcatggtcaaacgggtggaatttacgtgcacgagtccggt
caggggcaattcattgaaaaccggattcattcgaacaattttgcgggtgtatggatcacc
tctaattcgaatccgaccatccgccggaatgaaatctataatggccatcagggtggcgtt
tatatatttggggagggccgtggattgatagagcacaacaatatctatggaaatgctttg
gcaggcatccagattcgtaccaacagcgatccaatcgtgcggcacaataaaattcatcac
ggccaacacggtggcatctatgtccacgaaaaaggacagggattaattgaagaaaatgaa
gtttacgccaataccctagctggagtttggataaccacaggctccactccagtgttgagg
cggaataggattcactctgggaagcaagtgggcgtctatttttatgataatggtcatggc
cgcctagaagacaacgacattttcaatcatctgtacagcggtgtgcagattcgaacgggt
agtaatccaattattcgtcggaacaagatttggggagggcaaaacggtggagttctggtc
tataacggaggtcttggccttctagagcaaaacgaaatctttgataatgcaatggctggt
gtctggataaaaacggactctaatccaacattgaagcgtaataaaatttacgatgggaga
gatggaggaatttgcatttttaacggtggtaaaggcatcttggaagaaaacgatatattc
cgcaacgcgcaggccggagttctgatctcaacgcaatcacacccgatccttcgacgaaat
cgaatatttgacggtctagcggcaggcattgaaatcacgaacaacgccacagcaacatta
gaattcaaccaaatctttaacaacagatttggaggactttgtctggcatcaggcgtcacg
cctatttgcaaagggaacaagatctttaataaccaagatgcggtagagaaggccgtgaat
ggtggtcagtgcctctacaagatctcgtcttacacatccttcccgatgcatgatttctac
cgatgtcgcacctgtaatacaaccgatcgtaacgctatatgcgttaactgtattaagaca
tgtcatgccggacacgacgtcgaattcatccgacacgaccgttttttctgcgactgtgga
gccggtacattgacgaatcagtgccaactccaaggagaatccacacaggataccgatacg
ctttacgattcggcagcgcctgtagagtctcatacggtgatggtcaactga
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