Daphnia magna (water flea): 116919842
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Entry
116919842 CDS
T07514
Name
(RefSeq) small conductance calcium-activated potassium channel protein isoform X3
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmk04040
]
116919842
Ion channels [BR:
dmk04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116919842
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
SlyX
XhlA
Motif
Other DBs
NCBI-GeneID:
116919842
NCBI-ProteinID:
XP_032781784
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Position
LG3:complement(738964..788723)
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AA seq
1104 aa
AA seq
DB search
MASLSTERAVSLSRGDSTDNLLTTDLSPPEVLLEPTVSGKDDDEEEEEPSSQRPAGASHR
SLQSVYKNQSSSSVSSSVSGTTAAARPLLTAPSFDQRQAPDLVDASPWSSTETSCRSRKN
SVNLVEGWNQGNGQNHNNNTLAINQRLGDVAVRTAPPSQSSVDSAIISTAAGIIAGCGGQ
TTRTNRSVPDIELHYRRDNSDERACGSVGEPSPRLYNRHGPHHSQSSFAPHYHHHHSSLL
SQQQQQHGGPPTHLHQHQQGVHHSSRYHPVHPSVGVIPSRPRVCEHQPFSFSLSRATSRE
SVRSGVGQSGFYGHGQESSLRLPSSQLVPELAASLATSGYSAAGSFRGEMLRQHSQPETS
CYHCHNPSSSLRQLKESGGSSGGGGCDIAGIAADTLRINGAIRQFRQLQSATKIRRSRFQ
RAYTDAASETLTPGSTAAAGQVLATSAVVPPVSITLRKPVSTLSIPSSMKATGGSRNDGN
EEATTALVSVHSEYPRYTEDRCQVQQQQQLVSVSVGGNSSSVKSSALGGISIAATGTPGA
VGSGASGVGQVMAASSSTGGGMGVTPLAMGKNRPNVGYRLGRRKALFEKRKRISDYALVI
GMFGIIIMVIENELASAGVYTKASFYSTALKTLISVSTVILLGLIVAYHALEVQLFLIDN
CADDWRIAMTWQRMSQISFELLICAVHPIPGEHYFLWTTKLANHGGVIGSKWVPVDVALS
LPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMV
SLWIIASWTLRQCERYHDEEHANLLNTMWLIAITFLSVGYGDIVPNTYCGRGIAVTTGIM
KGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTKLV
KRVNPGRVRTHQRKFLLAIYSLRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSEMNTRQ
DVMEERLSTLEEKLTLLQETLEALPEAISRYLPTVVNNAPFSGATSGWSQPPQTESNGTE
LQRRQQFLHPESTYGSIGGGASGATNSAAAAAAAGNGGGGVTHSRSSPGTWTATSPAGAS
TSTALPVPAQPPQPPPLPSKPKLS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctgtcgacggaacgagccgtcagcctaagccggggggactcgactgacaac
cttttgaccacggatttgtcgccaccagaagtccttctcgagccgaccgtctccggcaaa
gatgatgatgaggaggaggaggagccgtcatcgcagcggccggcgggggctagtcatcgt
tcgcttcagagcgtctataagaaccagtcgtcctcgtctgtgtcgtcttctgtgtcggga
acgacagcggcggcgcggccattgctgacggccccatcgtttgaccaacgccaagctcct
gatctggtggacgcgtcgccgtggagttcgactgagacgtcgtgccgcagtcgaaagaat
tccgttaatctggtggagggctggaaccaaggcaacggccaaaaccacaacaacaacacg
ttggccatcaatcaacgcctgggcgatgttgccgttcggacggcgccgccatcgcagagc
tcggtcgactcggccatcatcagcaccgccgccggaatcattgccggttgcgggggccag
accacccgcaccaaccgatctgtgccggacatagaactccactatcggcgcgacaacagc
gacgaacgtgcgtgtgggagcgtgggcgagcccagccctcggctgtacaaccgtcacggc
cctcatcattcgcagtcgtcctttgctccgcattaccatcatcatcacagctcgttgttg
tcacagcaacagcagcaacacggcggcccgcctactcacctacaccagcatcaacagggt
gtccatcactcttcgcgttatcaccccgttcatccgtcagtgggtgttattccgtctcgg
ccccgtgtctgcgaacatcagccgttttcattttcgctgtcaagagccacgtcccgtgaa
tcggtccgttcgggagttggccagtcgggattttacggccacggacaggaatcgtctttg
agattgcccagcagtcagctggtgccggaactggctgcttcgctggctactagtggttac
tcagccgccggaagttttcgaggcgaaatgctgcgccaacattcgcagccggaaacgtcc
tgctatcactgccacaacccgagctcctcgctgcggcagttgaaggaatcaggcggatct
agcggcgggggaggctgcgatatcgccggcatcgctgcagacacgcttcgcatcaatggc
gccatccggcagttccgccagctgcagtcggcgacgaaaatccgtcgatcccgctttcag
cgcgcctacaccgacgccgcttctgaaacgctgactcccggctcgacggcagcggccggt
caagtgttggccaccagtgcggtcgtcccgcccgtctccatcacgttgcggaaaccggtg
tccacactgtcgataccttcttccatgaaagccaccggtggcagcagaaatgatggcaac
gaagaggccacgacggcgctggtcagcgtccattcagagtacccacgctacacggaggat
cggtgccaggtgcagcagcagcagcagctggtcagcgttagcgtcggaggcaacagcagc
agcgtcaaatccagcgctttgggaggcattagcatcgccgcgactggcacgcctggagcc
gtcggaagtggtgcatccggcgtcggacaggtcatggccgcctcgtcttcaaccggcgga
ggaatgggtgttacgcccctggctatgggcaagaaccggcccaatgtcggctaccggctc
ggcagacggaaagctctctttgagaaacgcaagcgaatcagtgactacgcactcgtcatc
ggcatgttcggcatcatcatcatggtcatcgaaaacgaactggccagtgccggcgtctac
accaaagcatcattttactcgaccgccttgaaaacgttgatatcagtctcgacggtgatt
ctcttgggtttgatagtggcctaccatgccttagaagtccagttattcctgattgacaat
tgcgcggacgattggcggatcgccatgacgtggcaacggatgagccaaatcagcttcgag
ctgctcatctgtgccgtccatcccattccgggtgaacattactttttgtggacgaccaaa
ttggccaaccacggcggcgtcatcggatcgaaatgggtgcccgttgatgtcgcacttagt
ttgcccatgttcctaaggctctacctcatctgccgagtcatgcttcttcacagtaaacta
tttacggacgcatcgtcgagatcgattggcgccctcaaccggatcaatttcaacacgcga
ttcgtcctcaaaacgttgatgaccatttgtccaggcaccgttcttctcgtatttatggtg
tcgctatggatcatcgccagctggacgctgcgtcagtgtgaacggtatcacgacgaggag
cacgccaatctgctcaacacgatgtggttgatcgcaatcacgtttctgagcgtcggctac
ggtgacattgtgcccaacacgtactgcggtagaggtatcgctgtcacgactggcatcatg
aagggtgctggctgcacggcgttgctcgttgctgtcgtctcgaggaaattggagctgacg
cgggcagagaaacacgtccacaacttcatgatggacacacaactcaccaagcgcttgaag
aacgcggccgctaatgtcctgcgagagacgtggctaatctacaagcacacgaaactggtg
aaacgcgttaacccgggccgggtccgtacccatcagcgcaagtttttgctggccatctac
tcgctgagaaaggtcaagatggaccagcgcaaactgatggacaatgccaacaccatcact
gatatggccaagactcaaaacaccgtttacgaaatagtctctgagatgaacacacggcaa
gatgtcatggaggaacgtctcagcactttggaggagaagttgactttacttcaggagacc
ctcgaagctctgcctgaggccatttcacgctacctgccgaccgttgtcaataatgcgccg
ttcagcggcgctaccagcggctggtcgcagccgccacagacggaaagcaacggcaccgag
ttacaacgacgacagcagtttctgcatccggaatcgacctacggcagcatcggcggaggg
gccagtggtgcaactaattctgccgcagcagcagcagcagcaggaaatgggggtggtggt
gtcacgcattcgagatcctcgcccggaacgtggacagccacttctcccgcgggagcgtcc
acatcaacggccctgcccgtacctgcgcaaccacctcagccaccgccgctgccatccaag
cccaaactcagttaa
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