Daphnia magna (water flea): 116919884
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Entry
116919884 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase lubel
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116919884
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116919884
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116919884
Multi subunit type E3
LUBAC complex
116919884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
IBR_1
E3_UbLigase_RBR
IBR
zf-RING_2
IBR_2
DUF2387
Motif
Other DBs
NCBI-GeneID:
116919884
NCBI-ProteinID:
XP_045026346
LinkDB
All DBs
Position
LG3:1993532..2001273
Genome browser
AA seq
1578 aa
AA seq
DB search
MSSFHQQVPQQPPQQFSTQPPQQHQNSLLDEIDAVEDDDDEEEERYIEMEEKEPLYERVQ
FPPASSTTVASTNNPDEAQGKSQSNSSDQRSGRESISKSPSIEKNPKTYYQKNETAYPTA
ISKERAESQSVSPNLAEPNKRKNNQEKGETKVTATTTPAQGLAALKSLIAKAAAGTLSSK
SSLTKTQDETTTKIEKKVENIESSSQKIRSSDQAKNAPSSSKIVVSSVLKPSKATVSTST
STSTCTSTATEPAEDVAQENDYWLEEKLKMQNTAAYQSFQKGALLKKNLTSKGTSPPPQT
ISTQTYEAVDPIREIAKIQEIPAPKLKRTLSLNMGARDLKEQGQEPLTGRHNFMSRRFQH
KNNPDNRRNYTGSTQSLHQILHDESPPPRTTSGTFSDRSLSQESMEMMEESDGPYRMGKS
SRNRNNRSMKDLAMERPSFHKRNYESDYDERRYSNTSSSRYRPEYRPLGRERHPPHAAPA
LESRRRMFEREQQGSRRWEPEYSDSYSDVDFKRQYSNDISRDRGRERERERVTEYRRLFQ
PPSPAPEDFRLKKPSMRRQDSNTSKSSQESSFNRHYPEGLFDTYRSRFEGRSGRGTSSEK
SAPSSRGGSVSSSEPLPLLESRRTLAGQLKPMDYRSGAPEDSLLKRRTKPIPQKVIQEQS
PVVKLDSLIKEAKELGFEAEHLQIALSLCGDSQPVNWLRDNWLNMIDTVVTLATNYGHER
PDNNIGTLTREEAIRAVLKNQGNIWNSVTECVEERQRKFNDLLIRGKGEFDRQDIITALT
ASAGNTDIAYAELCRPPPPPLPSTSPPAPFHERSDSSSSPIPFADDSSDSEPEEELPAAP
GPITTSIKQPNNTRSVENLLYFQAAQDHEEDDIYQDISDPDDDAMAVVPAKSVSENDNEV
ELFSTAESSQNDVTEIDGIEVADTRDEIVDEEMKDVMEKLDQDLHRITQMSDEIGRAIAV
SESQSPALMQEDDQTELKNDEDITVKLSNAGLENEANEPSIADDPEDNEAETFNVDVAEV
EEEAIELAEEATDEVLTHDERETENVNKIDQEMLDQSEELPGKTEEIPHQSEPIYEEYEK
TNVPVADISTSVPMAVEEDDEFNNIDYIDDDEYEDEYEEEYEEDVAGAISDEHGSAEDVE
RPFSADIFERHVQKVIEEDFPDTKDAKAPAVQIISSKLNQVMSREVAATKSTPEVVLAPY
ERKVRQLLAEGKAVSYEKAELAARLMDLKFNEDESIYAANECGSLYMAISYLQQDCELCA
NKYGVKEMVSMLHCTHRCCRGCAETYFSTQIRDRTIVDAVCPFCSEPSKLAEDEELAMDY
FTHLDILLKGIVPPNIHELFQHKLRDRTLAKDPNFKWCNKCSSGFIANPRQKRXLYAQIA
EPXRAQLAWEKQHEGLTCEKFAEWKEANDPEYQAEGLAKHLAENGIRCPQCRFQFSLTRG
GCMHFTCTQCKYEFCSGCDRQFLMGARCGVGPFCDKLGLHAHHPRNCILSARQRAARSPA
AFDGIGEHGVPFMTEPPDSTENPKQCAVQLQRETSDGLVDDVCSNEVKEGQAWALQAPLC
GIPCGFDYQKRRGSIGYL
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttccatcaacaggttcctcaacaacctccccaacagttctctacacagccc
ccacaacaacaccagaactcactgctggatgaaatcgatgcagtggaggatgatgatgat
gaagaagaagaacgttatatcgaaatggaggagaaagaacccctttatgaacgtgtccag
tttcctcctgcttcttcaactaccgttgcttctactaataacccagacgaagcccaaggt
aagagccagtcaaattccagtgatcagaggtctggaagggagtccatctccaagagtcca
tcaatcgagaaaaatccgaaaacatactatcagaaaaatgagacagcgtaccctaccgca
atttccaaagaaagggccgaaagccagtctgttagtcctaatctagctgaacctaacaag
agaaaaaacaatcaagaaaaaggagaaacaaaagtcacagcaactacgacaccagcccaa
gggttggcggctttaaagagccttatagccaaagcggccgcaggaacgttgagttccaag
agctcactgactaaaactcaggatgaaactactacaaaaattgaaaagaaagtcgaaaat
attgaatcatcttctcagaaaattcgtagtagtgatcaggctaaaaatgcgccatcgtct
tcaaaaattgtagtgtcctcagttctaaagcctagcaaagcaaccgtatccacttctaca
tcgacttctacctgtacgtcaactgccaccgaaccagccgaggatgttgcgcaagaaaat
gactattggttggaagaaaagttaaaaatgcaaaatacagccgcataccaatcttttcaa
aaaggtgcactcctaaagaaaaacttgacttccaaggggacgtctccgccaccacaaacc
atatcgactcagacctacgaagctgtggacccaattagagaaatagctaaaatccaagaa
attcctgctcccaagctgaaacgcacgttgtctctaaacatgggagctcgagaccttaaa
gaacaaggacaagaacctcttaccggccgacacaatttcatgagccgcagatttcagcat
aaaaacaacccagacaatcgcagaaactacacaggttctacgcagagcttgcatcagata
cttcatgacgaaagtccacctccaagaacgaccagtggaacattctctgatcgcagttta
tctcaagaatcgatggaaatgatggaagagtctgacgggccctaccgtatgggtaaaagc
agccgaaacagaaacaatagatctatgaaagatcttgcgatggaaagaccatctttccac
aaacgcaactatgagtcggattacgatgaacggcgatattcaaatacgagcagtagccgc
tatcgacccgagtatcgtcctcttggtagagaaagacatccacctcacgcagctccagcg
ctggagagtcgtcgaaggatgtttgaacgtgaacagcaaggcagtcgcagatgggaaccg
gaatattcagactcctatagtgatgttgacttcaaacgacaatattcgaatgatatatca
cgtgaccgtggaagagagagagaaagggagcgcgtcacggaatatagacgattatttcag
ccaccaagccctgcacccgaagatttcaggcttaagaagccatccatgagacgtcaagat
agtaacactagcaaaagcagccaagaatcttctttcaacagacactacccggaaggattg
tttgatacgtatcgatctagatttgagggacgatcgggaaggggaacatcatctgaaaaa
tccgctccgagtagtcgtggaggttccgtgtcaagttcggaacctcttcctttgcttgaa
tccaggcgaacattagctggccagctaaaacccatggattatcgaagtggtgcaccggaa
gacagtttgcttaaacggcgaacgaagcctataccgcaaaaagtcattcaagaacaatct
ccagtggtaaaactggattcgcttatcaaggaggcaaaagaattaggatttgaggctgag
catttgcaaattgctttatcactttgcggtgacagtcaacctgttaactggctcagggac
aattggctgaatatgatcgatacggttgtcacgctggcgaccaattatgggcacgaaaga
cccgacaataatattggtactctaacgcgcgaagaggccatccgtgcagtattgaaaaat
caaggcaacatctggaattccgtgaccgaatgcgtcgaagagcgccaaagaaaattcaac
gacttactgatccgtggtaagggcgagtttgatcgtcaggatattatcactgccttgaca
gccagcgccggaaacactgacatcgcgtatgccgagctgtgtaggccaccacctccacct
ctgcctagcaccagcccaccggctccttttcatgaacgatcagattcttcatcatctccg
attccatttgccgatgattcttccgattctgagccggaggaagaactacccgctgcacct
ggtcccattactacgtccatcaagcagcccaacaatacaaggagcgtagagaatttgcta
tacttccaggctgcccaagaccacgaggaagacgacatctaccaagatatatctgatcct
gacgatgatgctatggcagtcgttccggccaaaagtgtgtcagaaaatgataacgaagtc
gaattattttctacggctgaaagtagccaaaatgatgttaccgaaattgatggaattgaa
gtggcagacacgcgagatgaaattgttgacgaggaaatgaaagatgtcatggaaaaattg
gatcaagacttacataggatcacacaaatgtcagacgaaatcggaagggctatagctgtt
agcgagtcgcaatcaccggccttaatgcaagaagatgatcaaactgagttaaaaaatgat
gaagacatcacagtgaaactttccaacgcaggattggaaaacgaagccaatgaaccaagt
attgcagatgatcctgaagataacgaagcggagacattcaacgttgatgtcgctgaagtt
gaagaagaagccattgagctagcagaagaagctactgatgaagtcttaacgcatgatgag
agggaaacagaaaatgtaaacaaaatcgaccaagagatgttggatcagtcagaagagttg
ccgggaaagacagaagagataccgcaccagtcagaaccaatttatgaagagtatgaaaaa
acaaacgtgccagtagctgacatttctactagtgtaccgatggcagtcgaagaagatgac
gaattcaataacatagattacattgatgatgatgaatacgaagatgaatatgaggaggaa
tacgaagaagatgttgcaggtgccatcagtgacgagcacggatctgcagaggatgtcgaa
cgaccttttagcgccgatatttttgagcgccacgtacaaaaggttatcgaggaagatttc
cccgataccaaagatgccaaagcaccagctgttcaaataatctcttccaaactgaatcaa
gtaatgagtagagaagtagctgcaaccaagagcacacctgaagttgtccttgcaccgtac
gagcgcaaggtccgacaattgctggctgaagggaaggccgtgtcctacgaaaaagctgaa
cttgctgccaggctaatggatctcaagttcaacgaagacgaatcgatttacgcagccaac
gaatgcggttccctttacatggccatatcatatttacagcaagattgcgaactctgcgca
aataaatacggtgtcaaagagatggtttctatgcttcactgcacacatcgctgttgccgt
ggatgtgccgagacttacttttctacacaaattcgcgatcgaacaatagtagatgctgtg
tgtccattttgttcagaaccgtctaaacttgccgaggatgaagagttagcaatggactat
ttcactcatctggatattctactcaagggtattgtaccgcccaatattcacgagcttttt
cagcacaaattgcgcgatcgcactctagccaaggacccaaatttcaaatggtgcaacaaa
tgctcttcgggtttcatcgcaaatccacgtcaaaagcganncttatatgcccagattgcc
gagccgtgacgtgcgcaacttgcctgggagaaacaacacgaaggtttgacatgcgaaaaa
tttgccgagtggaaagaagccaacgatccagagtatcaagcagaaggtctggccaaacat
ctggcagagaatggaatccggtgtccccagtgtcgtttccagttctcattaacccgcgga
ggatgcatgcatttcacgtgcacgcaatgcaaatacgaattttgttccggatgtgaccgg
caattcctgatgggagcccgttgtggggttgggccattctgtgacaaactggggttgcat
gcccatcaccctcgaaattgcattctatctgcgagacaaagagccgcgagatctccagca
gcttttgacggtattggggaacatggggttccattcatgacggagccacccgattcaacg
gaaaaccctaaacaatgcgcagttcaactgcaaagagaaacttcagacggattggttgac
gacgtgtgctccaatgaagttaaagagggacaggcctgggctttgcaggctccattatgt
ggaataccttgcggctttgattaccaaaaacgacgtggatccattggatatctttag
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integrated database retrieval system
