Daphnia magna (water flea): 116920033
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Entry
116920033 CDS
T07514
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04130
SNARE interactions in vesicular transport
dmk04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116920033
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116920033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116920033
Membrane trafficking [BR:
dmk04131
]
SNARE
Syntaxin (Qa)
Stx-rER
116920033
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6827
DUF4298
Motif
Other DBs
NCBI-GeneID:
116920033
NCBI-ProteinID:
XP_032781982
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All DBs
Position
LG1:complement(1077382..1078506)
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AA seq
316 aa
AA seq
DB search
MMDITSLFKASIKTVRTRNKALGLNSKPEDPNRIFPRPSKDLTKFQTKAKEIVSNVAKLK
EFLTENRKAYLDTSVQLFNQVPKLSQADRAEFDHTTQLIIKTSNQYLQELKRENATHSHA
NAQTKEHRTIVINSIEQYFKSVCKTYTELKELYSKRQHELNKVTKLEGDGMASFRKSSLG
LESPSDSPRIYSSYDDDHQKTDEEKINFTVAEVQLFEKENSLLFNELNSLTEEVNQIQGR
VVKIAELQQVLTEKVLDQEKDIERIATTTVSATENIREGNEQLRQALQSNSGFRIAIIFF
ILVLFFSILFLDWYND
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatggatataacatcgctattcaaagcatcaatcaagaccgttcggacacgcaataaa
gctctgggattaaacagcaaacccgaggacccaaaccgcatatttccacgaccttcgaaa
gacttaaccaagttccagacaaaagcgaaggagattgtctccaatgtggccaagctaaag
gagtttttgaccgagaatcgtaaggcatacctagacacaagtgttcaacttttcaatcaa
gttccaaagttaagtcaagctgatcgtgcagagtttgatcacaccactcaacttatcata
aaaacaagcaatcaatatttacaggaacttaagagagaaaatgctactcatagtcatgct
aatgctcagacaaaagagcatcgcacaattgttattaacagcattgagcaatacttcaaa
tctgtgtgtaaaacttacactgagttgaaggagttgtactctaagcgccaacatgaactt
aataaagtcacaaaacttgagggagatggcatggcaagtttcagaaaatccagcttagga
cttgaaagtcccagtgacagtccaaggatctattccagctatgatgatgatcaccaaaaa
actgatgaagaaaaaataaattttactgtagctgaagttcaattgtttgaaaaagaaaat
tcccttttgtttaatgaactcaatagtcttacggaagaagtcaaccagattcaaggacgt
gtagtcaagattgccgaactgcagcaggtcttgaccgagaaagttcttgatcaagaaaag
gacattgaaaggatcgccaccaccaccgtctcggcaactgaaaatatacgcgaaggcaac
gagcaacttcgacaagcattacagagcaattctggctttcgaatcgccatcatctttttt
attcttgttctgttcttttccatacttttccttgattggtataatgattga
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