Daphnia magna (water flea): 116920136
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Entry
116920136 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: sin3 histone deacetylase corepressor complex component SDS3
KO
K19201
Sin3 histone deacetylase corepressor complex component SDS3
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116920136
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116920136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sds3
HFX_2341_N
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
116920136
NCBI-ProteinID:
XP_045029000
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All DBs
Position
LG4:complement(11622173..11624093)
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AA seq
388 aa
AA seq
DB search
MGEMAYVGSPSRGSSSFPYSRTAPSLVEEISAAQFSNSNVRGIEEDLALIRQGEQAQLLQ
PSDEDTEDASETDQQKKEDEYTEMREQIYRDKLAYLKQQLEQLEQGLHPDYLRKLKKLET
VYKSRLLLNEVWKDYEMQRAEEEYINEKQSASRELEEKKIELQENLISELEEKKRHVETE
RVTIELTGDSMEIKAPTTRKLRRRPNDPINVNSSSGPSDKRRKMAPAQLAYLLDENDVAD
DLRAIERGASGPPPTKPSGGTGQSAIRGSNNGIPNRRSNYSSPARQSDQSPSRSPVQGQS
YGYSGWNSGENQATFEARVEDGKLFYEKRWYHRGQTVQVEGKKARFAGVISAIGTEAVWV
RRPADGGKVKISIWQLCRGKYTLGRKAP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatggcttacgtagggtctccttctcggggatcgtccagtttcccctacagt
cgcacagctccaagcctagttgaagaaatcagtgctgcccagttttccaattcaaatgtc
agaggtattgaagaagatttggctctcatcagacagggggagcaagcacaactattacaa
ccaagtgatgaagatacagaagatgccagtgaaacagatcaacagaagaaagaagatgaa
tacactgaaatgagagaacagatttaccgggacaagttagcctatctgaaacagcaacta
gaacagcttgaacaagggcttcatcctgattatctaaggaagttaaaaaagctagaaact
gtctacaaatctaggcttctactaaatgaagtatggaaggactatgaaatgcaaagagca
gaagaagaatatattaatgaaaagcaatcagcatcaagagaattagaggagaaaaaaatt
gagttacaggaaaatctcatttctgagttagaagagaagaaacgccatgtggaaaccgaa
cgcgttactatagaactcaccggagattccatggagattaaagcgcctacaacaagaaaa
ctacgccgtcgtcctaacgatcccatcaatgttaattcttcgtcaggcccttctgacaaa
aggagaaagatggccccagcccagttagcttacctacttgatgagaacgatgtagctgat
gatttaagagctattgaacgtggggcatctggccctccaccaactaaaccctcgggaggc
actggtcagtcggctattcgaggttccaataatggcatccccaatcgccgaagtaactat
agttccccagcaagacagtcggaccagtcaccatccagatcgccagtacaaggccagtct
tacggctattctggttggaatagtggagagaaccaagcgacattcgaggctcgagtagaa
gatgggaaactgttttatgaaaaacgatggtaccaccgggggcagacagtccaagttgag
ggaaagaaggcccgctttgctggagttatttccgcgatcggcacagaagcggtttgggtg
cgtcgcccagctgacggcggcaaagttaaaatttccatttggcagctttgccgaggtaaa
tacacactcggccgaaaagctccatga
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