Daphnia magna (water flea): 116920138
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Entry
116920138 CDS
T07514
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116920138
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116920138
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116920138
04121 Ubiquitin system [BR:
dmk04121
]
116920138
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116920138
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116920138
Membrane trafficking [BR:
dmk04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
116920138
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116920138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
HTH_VMAP-M9
Motif
Other DBs
NCBI-GeneID:
116920138
NCBI-ProteinID:
XP_032782101
LinkDB
All DBs
Position
LG4:11624247..11625810
Genome browser
AA seq
383 aa
AA seq
DB search
MLKSVLKHYWFTGAATVAVVASAAYFVAVGEPDSERKTVKNPKSKPKNKLSGLINEGNTC
FINATLQALASCPIFFNWIDSVLTRKTSDITEHYLRTTCSLNMTMAVINNQHPTIDVHTF
NSRQLIQSLEKHGWNLKSEEQDAHEFFNMLSTTIDEEINKNNKISKGISIDEQATTSVCQ
PNSSSPFRGYLASQLCCLSCGHKSVRYDAFECLSIPLPKLDVRNAFTMLNVEGLLKQFLA
AETVGEVQCDSCSLKNGKSVFLKQLSLGKLPQCLCLHIQRCDWTNAGQLTKRQDLVRFSE
ELNVGNFVYTNRLSGNFKPVTYRLRAVVEHLGMADSGHFVTFRRNIVDGRTRWFYTSDTF
TRTATFDEVLKSSPYMLFYERCT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatcagttttaaaacattattggtttactggggctgccacagtagcagtggtt
gcatcagctgcatactttgtcgctgtaggagagccagatagtgaaaggaaaactgtgaaa
aacccgaagagcaaacctaaaaacaaattgtctggtctaataaatgaaggaaatacctgc
tttatcaatgccaccttgcaggcattggcatcgtgtcccatcttctttaactggattgat
tcagtcttgacaagaaagacatcagatattactgaacattatctcagaaccacctgcagt
cttaacatgacaatggctgttataaacaatcaacacccgactattgatgtacatacattt
aattcaagacaattgattcagtcattggaaaaacatggctggaacctcaagtcagaggaa
caagatgcacatgagtttttcaacatgttatccactactatagatgaagaaatcaacaag
aacaataaaattagtaaaggaatatcaattgatgagcaagcaactaccagtgtttgtcaa
ccaaactcttcttcaccatttagaggctatttggctagtcaactgtgttgtttatcatgt
ggacacaaatctgtccgatacgatgcattcgaatgtttatcaattccgttgccaaagttg
gatgtgcgaaatgccttcaccatgctcaatgtagaaggtttgttgaaacagtttctggct
gcagaaacggtgggtgaagtacaatgtgatagctgttcgttgaagaacggaaagagcgta
ttcctgaagcagcttagcctcggcaagctaccgcaatgtctgtgtcttcacattcaacgt
tgcgactggaccaatgccggccaattgacgaaacgtcaagatttagtcagatttagcgaa
gaattgaatgttggtaattttgtctacaccaatcgactttccggaaacttcaaacccgtt
acttaccgattacgggccgttgtcgaacatctgggaatggccgattctgggcattttgtt
acctttagacggaatatcgtcgatggccgcacaaggtggttctacacctccgacacgttt
acaaggacggccacatttgatgaagttctcaagtcaagcccctatatgctattttatgaa
cggtgtacatag
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