Daphnia magna (water flea): 116920143
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Entry
116920143 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC116920143
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116920143
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116920143
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116920143
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C67
116920143
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116920143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Ribosomal_L27A
CAP_GLY
UCH
Pkinase_fungal
ABC1
Kdo
Kinase-like
APH
Haspin_kinase
YDR124W_N
Motif
Other DBs
NCBI-GeneID:
116920143
NCBI-ProteinID:
XP_045028009
LinkDB
All DBs
Position
LG4:11735172..11748021
Genome browser
AA seq
1169 aa
AA seq
DB search
MGNRATRQETCDAVCRDKFENKSSDFFYDPLASFRVNNGAPIKSLKKTCYSKAKTVWPLP
NHELPFFPEFPIKSVTSEHSFNVISVVSSGAYGKVLHVVHKEEAKNYAMKVLSKNMIFKE
NLVQQVKVEAQIQVMCDHHPFLVRGPFRWQNKRNLFIVTEFIEGGDLQQLWQETGCFHED
LIKIYVAEIALVLDFLHNAGIIYRDLKMENLLIDGNGHLKLIDFGLSKWLSHGDRCHTLC
GTRQYMAPEILRLESYTHAVDWWSLGVLFYALLRGKLPFFGNSEVPAARETPLDFSDDDM
NGGSSASESARRLIRGLLTVDALKRVRSLRTLKNHAFYHHFDFESLRSKKVCNKRGRGQH
GGKKHGAGNKGSGQRQNFMRLGYETGNNPFYLRVPKEPYYKGHHLRREYPPISLMQLQTL
IDTGRLDTSKPIDLSALCNTKLFQLSPLENQYGFQLTDEGLDNFKGRVNIEVQYASEQVI
SAIERNGGVITTAFYDAPSLIAMRDPMKFFASGNPIPKRQMPPENAVEYYTDPKNRGYLA
DPDLIALERFKLAQKYGYELPDLKKDPELLPMMLERKDPRQIFFGLNPGWLVNLKDKKIF
EPEDEQLLEYFGSPPHSPLKSPTDSYQAYHYAVPATRPTPENSSSVNSDSLAQEFSQLAS
DLHDGMEVGSLVEVLFAGRQLFGVVRWCGKSRNKSEQGLVGVELECDIDEGSDGNYLGQQ
FFRCAPGRGVFVPFRHCRADSRFSSSFDVTKPTAFGRNYETSSELENGGPECPSVSGEVP
PVGQFGDWSKLTGKFRGIQGHHNSCYLDATLFSMFTFTSIFDGLLYRPPTRNDIPQYEEV
QRILKEEIVNPLRQHYYVRADKVMKLRRLLQKLGSVKGLTNEEKDPEEFLHCLLSQTLKA
EPFLKLSSGQEAYHHQLFVEKDDKLVMPTVQQLFEQSFLSSGIKLKEVPPVLIIQMPRFG
KSYKMYPYVLPSSLLDITDVLENSPRQCIVCGHLAEMECQQCLGQCGSGLESIAFCAPCL
YKVHSHKKRTTHQAQPLQVPADFAALQEHCIIPRMYMELFAVVCIATSHYVAFVKCGPGP
DAPWCFFDSMADRKGEQNGFNIPEVITCPDLPRWLSDEWDKQLLSNGLDPSSSSSSSNPS
GAGLPDYVRRLFSDAYMCLYQSPDLMLYR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgagctactcgtcaggaaacatgtgatgctgtttgtcgtgataaatttgaa
aacaaatcttcagacttcttttatgatcctctcgcaagcttcagggtgaacaatggagcc
ccaataaagagcttgaaaaaaacttgctactcaaaagcgaaaacggtttggccccttccc
aaccatgaacttccctttttcccagaatttccaatcaaatctgtaacgtctgagcattct
ttcaatgtgatatcggttgtttcatcaggtgcttatggaaaagttcttcatgttgtccat
aaagaagaagcaaagaactatgccatgaaggttttgtcaaaaaatatgatatttaaagaa
aatctcgtccaacaagtcaaagttgaagctcaaatacaagtcatgtgtgatcaccaccct
ttcctcgtgcgtggcccttttcgttggcaaaacaaaaggaatctctttatagtgacagaa
ttcatcgaaggcggcgatctgcagcaactttggcaagaaaccggatgtttccacgaagac
ttgatcaaaatttatgtagccgaaatagccttagtattagatttccttcacaacgccggc
attatttacagagatctgaaaatggaaaatcttttgatcgacgggaatggacatttaaaa
ttgattgatttcggcttgtccaaatggctgtcccatggagatcgatgccatactttatgc
ggcactcgacagtacatggctccagaaattttgcggctggaatcgtacacgcacgcggtt
gattggtggtcgctcggcgttctgttttacgctctgcttcgaggcaagttgccctttttt
ggcaactcggaggtcccagctgctcgagagactccactagacttctcggatgatgacatg
aatggcgggtcgtcggctagtgaatccgcccggcggcttattcggggcctcttgaccgtt
gatgcactgaaacgagtccgcagtctacggacgctgaaaaatcacgctttctaccatcac
tttgatttcgaatcacttcggtccaaaaaggtatgcaacaaacgtggcagaggacaacat
ggtggcaaaaaacatggagccggaaacaagggctcagggcaaaggcagaacttcatgagg
cttggatatgaaacaggaaacaatccattctacttgagggtccccaaagagccatactac
aaagggcaccatttgagacgagaatatccacccatctcgcttatgcagctacagaccttg
attgatacaggaaggttggatacctctaaacccattgatctgtctgcattatgcaacacc
aaactttttcaactatctccacttgaaaatcaatatgggtttcaactcactgatgaaggc
cttgacaatttcaaaggtagggtaaacatcgaagtccagtacgcttcggagcaagtgatt
tcagccatcgaaaggaatggcggagtcataacaacggccttttatgatgccccatcctta
atagccatgcgggatcccatgaaattcttcgccagtggaaaccctataccaaagagacaa
atgccacctgaaaatgcagttgaatattacaccgaccctaaaaatcgaggatatctggca
gatcctgacttaatcgcattggagcgcttcaaacttgctcagaaatacggttatgagctt
ccagatttaaaaaaagatccggaacttctgcccatgatgcttgaacgtaaagatcctcga
cagatcttttttggtctcaatcctggatggttggttaacttgaaggataagaaaatcttt
gaacctgaggatgaacaattactagaatactttggatcacctccacatagccctctgaaa
tcaccaacagattcttatcaggcttatcattatgctgttcctgctactaggccgacacct
gaaaattcatcttcagtcaacagtgactctttggcacaagagttttcccagttggcgagc
gatctacatgatgggatggaagtaggctccttagtagaggtgttgttcgctggcagacag
ttatttggtgtagtgagatggtgtggcaagtctagaaataagtcggagcaaggtctagtc
ggagttgaattggagtgtgatattgacgaaggctcagatggcaactacctaggccaacag
ttctttcgttgtgcgcctggtaggggtgtatttgtcccatttaggcactgcagggccgac
tcgaggttcagtagctcctttgatgtcacgaaacccacggcctttggaagaaattatgaa
acttcttccgagctagaaaatggaggcccagaatgcccatcagtgtctggtgaagttccc
ccagtgggtcagtttggtgactggagtaagctgactggaaaatttcgcggaatccagggt
catcacaattcttgctacctggatgcaacgctctttagtatgttcacctttacaagcatt
tttgacggtctgctttaccgaccaccgacgcgtaacgatataccgcaatacgaggaagtg
caaagaatattgaaagaagaaatagtaaatcctttgcgtcagcactattatgtgcgggct
gataaagttatgaaactgcgccgtcttcttcaaaaactagggtctgtcaaaggtctaacc
aacgaagaaaaagatccggaagagtttcttcattgtttgctgtcccaaacgctcaaagcc
gaaccgtttttgaaactgagctctgggcaagaagcttatcatcatcagctctttgtggaa
aaagacgataaactcgtgatgcctaccgtccaacaactttttgaacaaagtttcctgtct
agtggcattaagctaaaagaagttccaccagtgctcattattcaaatgcctcgcttcggg
aaatcttataaaatgtatccctatgttcttccgtcctcacttctggacattacggacgtc
ttagaaaactcccctcggcagtgcatcgtgtgcggccatttggctgaaatggaatgtcag
cagtgtcttggccaatgtggctccggcttggaaagcatcgctttttgtgcaccttgtctt
tacaaagtccacagtcataaaaaacgaacgacgcaccaggctcagccgttgcaagtaccg
gcagattttgctgccttgcaggaacattgtattataccgcgcatgtacatggagctattt
gctgtcgtatgcattgcgacaagtcattacgtggctttcgtgaagtgtgggccggggcca
gatgctccttggtgtttctttgattcaatggctgatcgtaaaggtgaacaaaatgggttc
aacatacccgaggtgatcacttgtcctgatctgccaaggtggctttcagacgagtgggac
aaacagcttctgtcgaacggcttggatccttcatcctcgtcgtcctcaagtaatccgtct
ggcgcaggtctcccggattacgttcgccgcctgttctccgacgcctacatgtgcctttac
caaagccccgatcttatgttataccgctaa
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