Daphnia magna (water flea): 116920305
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Entry
116920305 CDS
T07514
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116920305
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
dmk04031
]
116920305
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
116920305
GTP-binding proteins [BR:
dmk04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
116920305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116920305
NCBI-ProteinID:
XP_032782393
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All DBs
Position
LG4:complement(12659228..12661104)
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AA seq
335 aa
AA seq
DB search
MVQIRVQGETIGAFPVSDLPLPIVETVDAATPSAVSDLVEVVSTSRLRRSRQSASLLPVP
RPIPTNETISPILAPQLSAKPYDYLLKFLLVGDSDVGKQEILSTLENAASDMPFCAGPVH
KVTTLLVDGRRVRLQLWDTSGQGRFCTILRSYSRGAQGLLLVYDLTNKWSFDGIDRWRRE
VEEHAPGVPKVLVGNRLHLEFKRAVSVAQAEAYAQRHGMAFFEISPLCNYNVAESLAELT
RRALRRNGMERLWRTNRVLSLQELCCRSIVSQTSVYTIDRLPLPPTLHSQLRSYALSSGC
ARHHPHHPNHHHEMKMAIKKSRLSHVHAKLTCVIS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagattcgtgttcaaggggaaacgattggggcattccctgtctcagatcttcct
ctgccaatagttgaaactgtagatgcagctactcctagtgccgtctcagatcttgtagaa
gttgtttccacttcacgattgaggaggagtagacagtctgctagcttattaccagttccc
agacccatcccgacaaatgagacaatcagtcctattctagcacctcaactctcagcaaaa
ccgtatgattacctgctaaaattcctcttagtgggagactctgatgtgggaaagcaagaa
atactcagcacattagaaaatgcagcttcagacatgcctttttgtgctggaccagtgcac
aaagttaccacattgctagtagacggtaggagagttcgtcttcagttgtgggatacatcc
ggacagggacggttttgcacaatattgcgatcctactctcgaggtgcccagggtctcctt
ctggtctatgacttgaccaacaaatggtctttcgatggaattgaccgctggcgaagagaa
gtcgaggagcatgctcctggcgtgccgaaagttcttgttggtaaccgacttcacttggaa
tttaaacgggcggtaagcgttgcccaagccgaagcgtatgcccagagacacggtatggct
ttctttgaaatctcgccgctgtgcaactataacgtagctgagtcgctggccgagctcaca
cgccgggcgcttaggagaaacgggatggaaaggctgtggcggacgaatcgagttctctca
ctccaagagttgtgttgtcgctcaatcgtctcgcagacctcagtctatactatagatcgg
cttcctctaccaccaacgcttcactcgcagctgcgttcctacgcacttagcagtggctgt
gcccgtcaccatccacaccaccctaaccatcatcatgagatgaagatggccatcaaaaag
tcaagactcagtcatgtacacgcaaaactcacctgcgtcatttcatga
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