KEGG   Daphnia magna (water flea): 116920316
Entry
116920316         CDS       T07514                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03013  Nucleocytoplasmic transport
dmk04141  Protein processing in endoplasmic reticulum
dmk04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116920316
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116920316
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    116920316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116920316
   04131 Membrane trafficking [BR:dmk04131]
    116920316
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116920316
Membrane trafficking [BR:dmk04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    116920316
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    116920316
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    116920316
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd WD40_Gbeta EIF3I Beta-prop_WDR75_1st Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd LbR_Ice_bind PAC11 NBCH_WD40
Other DBs
NCBI-GeneID: 116920316
NCBI-ProteinID: XP_032782415
LinkDB
AA seq 311 aa
MVSVISTVDTGHEDMIHDAQMDYYGCRLATCSSDRSVRIYDVKNGTQTLAADLRGHEGPV
WQIAWAHPKFGNILASCSYDRKVIIWKEMNGQWIKFYEYANHDSSVNSVCWAPHDYGLIL
ACGSSDGSISILSATAAGGWEAKKINNAHTIGCNAVSWAPAIGPNAAFDSSSGMRPAPVK
RFVSGGCDNLVKVWREDKEWVEEAKLEGHSDWVRDAAWAPSIGLSRTVIASCSQDRRVIL
WTNDGVSSSWNQRVLHTFEDVVWHVSWSVTGNILAVSGGDNKVSLWKETVEGQWVCISDV
NRGKGSAPGQQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atggtatccgtcatatccacagtcgatactgggcacgaagacatgattcatgatgctcag
atggactattatggttgccgacttgcaacatgctcgtccgacaggtctgtaaggatttat
gatgtgaaaaacggcacacagacattggcagcagacttaagagggcatgaagggccggta
tggcaaattgcttgggctcatcccaaatttggaaacattctagcatcatgttcatatgac
cgtaaagtcattatctggaaagagatgaatgggcaatggatcaaattttatgagtatgcc
aatcatgattcatctgtaaactctgtctgctgggcaccccacgactatggcttaatcctt
gcttgtggaagttctgatgggtccatctccattctttctgctactgctgcaggaggatgg
gaggcaaagaagatcaacaatgcccacactattggatgcaatgcagttagctgggcaccg
gctataggacctaacgcagctttcgactcttcttccggaatgcgacctgcacccgtcaag
cgatttgttagcggcggttgtgataaccttgtgaaagtctggcgggaagataaagaatgg
gtggaagaagctaaactcgaaggacattctgactgggttcgtgatgcagcttgggctcca
tctattggactgtcacgtacggttatcgccagctgctctcaagatcggcgagtaattttg
tggaccaacgatggagtttctagcagttggaaccaacgggttcttcacacctttgaagat
gttgtatggcacgtctcatggtccgttacaggcaacatcctggctgtgtcaggtggagat
aacaaagtaagtctatggaaggaaacagttgaaggccagtgggtatgcataagtgacgtg
aatcgaggcaagggatctgcgcctggccaacagtga

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