Daphnia magna (water flea): 116920316
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Entry
116920316 CDS
T07514
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
dmk04141
Protein processing in endoplasmic reticulum
dmk04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116920316
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116920316
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116920316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116920316
04131 Membrane trafficking [BR:
dmk04131
]
116920316
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116920316
Membrane trafficking [BR:
dmk04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116920316
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116920316
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
116920316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
LbR_Ice_bind
PAC11
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116920316
NCBI-ProteinID:
XP_032782415
LinkDB
All DBs
AA seq
311 aa
AA seq
DB search
MVSVISTVDTGHEDMIHDAQMDYYGCRLATCSSDRSVRIYDVKNGTQTLAADLRGHEGPV
WQIAWAHPKFGNILASCSYDRKVIIWKEMNGQWIKFYEYANHDSSVNSVCWAPHDYGLIL
ACGSSDGSISILSATAAGGWEAKKINNAHTIGCNAVSWAPAIGPNAAFDSSSGMRPAPVK
RFVSGGCDNLVKVWREDKEWVEEAKLEGHSDWVRDAAWAPSIGLSRTVIASCSQDRRVIL
WTNDGVSSSWNQRVLHTFEDVVWHVSWSVTGNILAVSGGDNKVSLWKETVEGQWVCISDV
NRGKGSAPGQQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtatccgtcatatccacagtcgatactgggcacgaagacatgattcatgatgctcag
atggactattatggttgccgacttgcaacatgctcgtccgacaggtctgtaaggatttat
gatgtgaaaaacggcacacagacattggcagcagacttaagagggcatgaagggccggta
tggcaaattgcttgggctcatcccaaatttggaaacattctagcatcatgttcatatgac
cgtaaagtcattatctggaaagagatgaatgggcaatggatcaaattttatgagtatgcc
aatcatgattcatctgtaaactctgtctgctgggcaccccacgactatggcttaatcctt
gcttgtggaagttctgatgggtccatctccattctttctgctactgctgcaggaggatgg
gaggcaaagaagatcaacaatgcccacactattggatgcaatgcagttagctgggcaccg
gctataggacctaacgcagctttcgactcttcttccggaatgcgacctgcacccgtcaag
cgatttgttagcggcggttgtgataaccttgtgaaagtctggcgggaagataaagaatgg
gtggaagaagctaaactcgaaggacattctgactgggttcgtgatgcagcttgggctcca
tctattggactgtcacgtacggttatcgccagctgctctcaagatcggcgagtaattttg
tggaccaacgatggagtttctagcagttggaaccaacgggttcttcacacctttgaagat
gttgtatggcacgtctcatggtccgttacaggcaacatcctggctgtgtcaggtggagat
aacaaagtaagtctatggaaggaaacagttgaaggccagtgggtatgcataagtgacgtg
aatcgaggcaagggatctgcgcctggccaacagtga
DBGET
integrated database retrieval system