Daphnia magna (water flea): 116920806
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Entry
116920806 CDS
T07514
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116920806
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116920806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
B-prop_COPA_B_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_EIPR1
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
PD40
Beta-prop_SPT8
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
116920806
NCBI-ProteinID:
XP_032782826
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Position
LG4:4325309..4332508
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AA seq
494 aa
AA seq
DB search
MKCCIPEISWHNRDPVLSIDLQPHSKDGFVRLATGGTDSHVLMWNVTIGENGVGTVEFLS
DLARHQRAVNTVRFSPNGEILASGDDEAVIILWMLKPKSDIPDLFSNKDAEAENQENWTV
LKILRGHMEDVYDICWSPDSCQLLSGSVDNTAILWDVSKGKSIHLFSEHKGFVQGVAWDP
KSQFIATLSSDRNCRIYSLKTKKVVQKLYQAQLKIGDGEEKPYKLFHDDTLKTFCRRLNF
SPDGLILFTPCGLLELNEGTDASEESEVRRKEKKINATYAFARNNNFAKPVAYYPSADRY
SVAVRCCPILYELRPGQPSLYDIPYRMVFAVATQNAILLYDTQQVTPFARIARIHYTRLT
DIAWSNNGRIIVISSTDGYCSIVTFNEKELGTPYEPAKCAEEAVSPSLPSSFQTLLQGEI
FQENVQPVTVADDEDFHLAYEDAEMTLDTPAPCPPTKSNLGCPAALKSPNRANVRSSPRR
VQLITLTSPTKTKN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgctgcattcctgaaatatcgtggcataaccgtgatccagtattaagcatcgac
ctgcagccacactccaaggatggcttcgtcagacttgctacaggaggaactgattctcac
gttctgatgtggaatgtaacaattggagaaaatggagtaggaactgtggaattcctgtca
gatttagccagacatcagagagctgtcaacacagtcagattttcacccaatggagaaatt
ttagcatctggggatgatgaggctgttattatactttggatgttgaagcccaaatcagac
atacctgatctgttttctaataaagatgcagaagcagagaaccaagaaaactggacagta
ctaaaaatacttagagggcatatggaggacgtgtatgacatctgttggtcaccagatagc
tgtcagctgttatctggctcagttgacaacacagcaattttgtgggatgtcagcaaagga
aagtcaatccatctattctctgaacacaaaggatttgttcaaggtgtagcatgggatcca
aagagtcaattcattgcaacattaagcagtgacaggaactgcaggatttactcacttaaa
acaaaaaaagttgtgcagaaactatatcaggctcagctgaaaataggggacggcgaagag
aaaccctacaaactctttcacgacgatactctcaagacattttgtcgtcgtttgaacttc
tcaccagatggtttaattcttttcacaccttgtggccttctagagcttaacgaagggact
gacgccagtgaagagagtgaagtgagaagaaaagaaaaaaagataaacgccacgtacgct
tttgctcgcaacaacaattttgcgaaaccagttgcatattatccatcagccgaccgctat
tcagttgctgtccgttgttgcccgattttatacgaattacgacctgggcaaccatccttg
tacgacattccttaccgaatggttttcgccgttgcaacgcaaaacgccattctcctctat
gatacccagcaggttacacctttcgcaagaatcgcccgtatacattatactcgacttaca
gatattgcctggtctaacaatggacgcatcatcgtaatatcatctacggatggctactgc
tcgattgtaacgtttaacgaaaaagaactcggcacgccttatgaacctgccaaatgtgca
gaagaagctgtctcgcccagtttaccttctagtttccagaccctactgcagggtgagata
ttccaagaaaatgttcagcctgtgacggttgccgatgatgaagatttccacttggcttat
gaagacgccgaaatgaccctggacacccccgctccatgtcctcccaccaaatcaaatctt
ggatgcccggctgcactcaaaagtcctaacagagcaaatgtgcgcagcagtccgaggcgc
gttcaattaataaccttaaccagtcccacgaaaaccaagaattag
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