Daphnia magna (water flea): 116920845
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Entry
116920845 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116920845
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116920845
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116920845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ank_2
Ank
IBR_2
Ank_5
zf-C3HC4_2
zf-C3HC4
Ariadne
Ank_3
zf-RING_UBOX
Ank_4
zf-C3HC4_4
UBA_ARI1
zf-RING_2
SesA
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
116920845
NCBI-ProteinID:
XP_032782880
LinkDB
All DBs
Position
LG4:complement(5556992..5564624)
Genome browser
AA seq
1440 aa
AA seq
DB search
MGSASSKFRKHIQHGDEYAAMQVYHNSPELRKSLDPNLSYGEHHQHNSAMHYASKHGMKH
LLRIFLTDLHGNPNKRNARNETALHLACKLALNAPPSAQERRLACVQLILQWKGGFSSAL
GGIEQADLKAQETSGNTVLHLAAGSGLDRIVELLVSHGAPLFLENYERSTPCDVAMKANF
HDIALFLESRMVFADAPIEMGTDLIEEPNYVRGAASAVVGPSFLDTEEVYTGLRAQDLQE
AKDQLVVETADMLHIPLFTAEALLRDNEWSRELLLEKWMTDPVLCCESMGLQTPLSALRF
RHSLPCESANILEASLEYLEAPPTSPCRSRISDQVEDFRDECCGICLEMLEQTSSRVYIP
CDHSFCQRCWSSYLTLKIIEGDAHHVTCPALGCSILVPVELIESLVSKETARKYLHFDLN
SFVATNPAIKWCPGTGCGFAVRLPESEQGQPNTINIFSPRAPPRTSHSVDCGNGHFFCWE
CLGDAHAPSGCEQWLQWLQKVAEVRPEELKSTCTESEDAANCYWLVTNCKSCPNCKSPIQ
KNEGCNHMKCSKCKFDFCWVCLDSWKKHSSATGGYFRCNRYEAMHKADEKQGSMISEAGQ
RNKQLQELNRFIHFYTRFKNHENSRLLEEPLLHSARRKMELLASSLPAARSPVLGHFDSK
GTTGCRPSLSGLPSAPACTRFIEEGIRELLKARRILCGSYVYGYYLEDNGYNKTIFEFMQ
NELESLTEKLSEMVARPYLRTPRSTIVNMTLRVRRKRHEFIRAVSKGLIPPETPPALRRV
RRRRFPGLMGMDPMEDDQITEAIAISLRQLDPNNPWVKDSQGRHTNLSAIYDWPDANSDE
EDSDVNQALTVSLLGVCDRQGCGRPRARNPRNGKIHPFCSLRCSRSESLDQPSIATADFA
MDLVIALEMSRLQLIEDEVRKQNHDQTASSNTVFELPSVESCSEDAQLRLAIFLSLEESG
KLVTDASAAAACQTTESSVENFMKTLAQNQDLSPQSYHLDQLDSAPIDKHGESEGRFEIS
ELHQNAGFFSSSLCEDQQLDTVSDGAVSSLPFPKRSHSACDIRTGVHVRCPSLELESHDC
IHELVEGISQGPPTRTLLRLQSLGTDYGSDEFGTCTSSEDNAQAREDEIPIPTMHKPKLV
RQSNVSGKTEISHTFRSAHTSCNQFPLLELDSFNSENTLSAVADENHRNGDLHHQVRKHS
PTLYCTTTYISGVAISRTPEPGAHSSQGVLDGSIKSGRGNRSSSLTTAVLPGMLQNHPLE
RGLSKSAGRLSINNYVAKDGSCRPKKRRHDIRRLTMPALLCSDNCEASFSPFPSASPRII
SRSACEPQRDKEVFQFPKSPTESQLSTVLLVRDCNQRDAFHEALFLPREHKRKRSKKSLA
NSAATSVPADLSKHGVCEVNADRPGHKNSGXQESSLLIVMSYLVFVCCYHVYVCQKAPKV
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcttcatcaaaatttcgaaaacacattcaacatggagatgaatatgcagca
atgcaagtttatcacaattcccctgaactaagaaaatcacttgatccaaatctaagctat
ggggaacaccatcaacataatagtgctatgcattatgcttcaaaacatggaatgaagcat
ctactgagaatttttttgacagatttgcatggaaatcctaacaagcggaacgctagaaat
gagacagctcttcaccttgcctgtaaacttgcattaaatgcccctccttctgcacaagaa
agacgtcttgcatgtgttcagcttattctgcaatggaaaggtggatttagttctgcttta
ggaggcatcgaacaggctgatcttaaagcccaagaaacaagtgggaatacagtcttacat
ttagcagctggatctggattagatcgaatagttgagctcttggtttcccatggtgctcct
ctctttcttgaaaattacgaaagatctactccttgcgacgtggcaatgaaagccaatttc
cacgatattgctcttttcttggaatcgcgcatggttttcgcagatgcaccaattgagatg
ggaactgatttaatagaagaaccgaattatgttcggggtgccgcgtcagctgttgttggt
ccttcttttctggatacagaagaagtgtacacgggacttcgagcgcaagatttgcaagag
gcgaaagaccagttggtagttgaaactgctgatatgctgcatatacccctttttacagcc
gaagccctattgagagacaacgaatggtctcgagaacttctgcttgaaaagtggatgact
gacccagtcctttgttgcgaatccatgggacttcaaacgccactgtcggctcttcgcttt
cggcattcgttgccatgtgaatctgctaacattcttgaggccagcttggaatatctcgag
gcacctccgacgtctccctgcagatcaagaatttccgatcaagttgaagatttccgtgac
gagtgttgcggcatttgcttggaaatgctagaacagacttcctctcgagtttatattcct
tgtgatcattcgttctgtcaacgatgttggtcaagctaccttacattgaagatcattgag
ggtgatgcccatcatgttacatgcccagctcttggttgttcgatattggtgccagttgaa
ttaatcgaaagcttggtatccaaagaaactgcccgaaagtatttacattttgatctgaat
tcatttgtggcgactaatccggctatcaaatggtgccctggtactggttgcggttttgct
gttcgattgcccgaatccgagcagggacaaccaaacacaatcaacatattttctcctaga
gctccaccacgcacttcccattcagtcgactgtggaaatggacatttcttttgttgggaa
tgtctcggtgatgctcatgcaccctcaggttgtgaacagtggcttcagtggcttcaaaag
gtagctgaagtgcgaccggaagaattgaaatctacgtgtactgagagtgaagatgcagcc
aactgctattggctcgtgaccaattgtaaatcgtgcccgaattgtaagtcacctatccag
aagaacgaaggatgcaaccatatgaaatgctcaaaatgcaaattcgatttctgttgggtg
tgtctggattcttggaagaagcatagctcagcaacgggtggctattttcgctgtaatcgt
tatgaagctatgcataaagcagacgaaaagcaaggttcaatgattagcgaagctgggcag
cgcaacaaacaattacaggaattaaatcggtttattcatttctacactcgttttaaaaac
catgaaaattcacgtcttctagaggagccgttgctgcattctgctcgcaggaaaatggag
ctcctagcatcttctttgcctgcggcccgtagtcctgttctggggcattttgactctaaa
ggtactaccggttgtcgcccctctttaagcggtcttcctagtgcaccggcatgcactaga
tttatcgaggaaggcattcgggaattgctgaaagcaagaaggatattgtgtggctcatac
gtttacggatactatctggaagacaacggctacaataaaaccatatttgaattcatgcag
aatgaattggaatcgttaactgaaaaattatcagagatggttgcgcgtccttacttgcgc
acacctcgttctacaatcgtaaacatgacgctgagagtccggcggaagcgccacgaattc
atccgcgccgtttcgaaagggttgataccacccgagactccccccgcgttacggcgagtg
cgccgcagaagatttcctggtcttatggggatggatccaatggaagatgaccaaataact
gaggcgatagctatatcactacgccagctagaccccaataatccgtgggtaaaagatagt
caaggtcgacacaccaacctgagtgctatctatgattggcctgatgcgaattcggatgaa
gaagactccgatgtaaatcaagctttgacagtgagtctattaggtgtgtgtgatcgccaa
ggctgcggacgacctcgagcccgaaatccaagaaatgggaaaattcatccattctgtagt
cttcgctgcagtcggagcgaatcgctagatcagccttcgatagccactgccgattttgcc
atggatttagtcattgcgttggagatgtctcgtcttcagttaatagaagatgaagttcgc
aaacagaaccacgatcagacggcatctagcaacaccgtgtttgaattaccttctgtggaa
agctgttcggaagacgcccaactacgtctggcaatttttttgtcgctggaagaatcggga
aaactggtcacggacgcgagcgctgctgcagcatgtcaaacgaccgaatcgtctgtcgaa
aactttatgaaaaccttagctcaaaatcaagacctttcaccgcaaagctatcacctagat
caacttgattcggcaccgattgataaacatggtgaaagtgaaggccgttttgaaatatcg
gaactccatcagaatgccgggtttttttcttcatctctctgtgaagatcaacaactcgat
accgtctccgatggggctgtgtcttcgcttcctttccctaaaagatcgcattcggcttgt
gacatacgaaccggagttcatgtacgctgcccgtcgttggagctcgaatctcacgactgc
attcacgagctagtggaaggcatttcacaaggtccaccgacacgcacgctccttcgcctt
caaagtcttggaacggattatggcagcgatgaatttggaacttgcacatcgtccgaagac
aatgcgcaagcaagagaggatgaaataccgataccaacaatgcataagccaaaacttgtc
cgccaatcgaatgtttctggtaaaacggaaatatcgcacactttccggtcagcacatacg
tcttgcaaccagttccctcttttggaattggattcttttaattccgaaaacacgttgtct
gcggtggcagatgaaaatcaccgtaatggtgatcttcatcaccaggtccgaaaacattca
cccactttgtactgcacaacaacatacatcagtggcgtagccatctctcgcacacctgaa
cctggagctcattcaagccagggcgtattggatggatccataaaatctggtcgaggtaat
cgttcttcaagtttaaccaccgccgtacttccgggcatgcttcaaaatcacccgcttgaa
cgaggtttatccaaatctgctggtcgtttgagtattaacaattacgtcgccaaagatggc
agttgccgaccaaagaagcgtcgtcatgacattcggcgattgactatgccagctcttctt
tgctcagataactgtgaggcgtcattttctccgtttccttcggcgtctccacgtataatc
tcgcggtcggcatgtgaaccacagcgcgacaaagaggtctttcaattcccaaagtcaccc
actgaaagtcaattgagtaccgtactattggtaagagattgtaatcagcgtgacgctttt
cacgaagccctgtttcttcctcgtgaacacaaacgtaaacgctcgaaaaaatctttagcc
aattcagctgctacatcagtaccagccgatctctcaaaacatggtgtttgtgaggtgaac
gcggatcgacctggacacaaaaatagtggctgacaagaatcttcacttcttatagtcatg
tcctacctggtatttgtttgttgttatcacgtttatgtttgtcagaaagcaccaaaagtt
tga
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integrated database retrieval system
